Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1313 | 4162;4163;4164 | chr2:178779255;178779254;178779253 | chr2:179643982;179643981;179643980 |
N2AB | 1313 | 4162;4163;4164 | chr2:178779255;178779254;178779253 | chr2:179643982;179643981;179643980 |
N2A | 1313 | 4162;4163;4164 | chr2:178779255;178779254;178779253 | chr2:179643982;179643981;179643980 |
N2B | 1267 | 4024;4025;4026 | chr2:178779255;178779254;178779253 | chr2:179643982;179643981;179643980 |
Novex-1 | 1267 | 4024;4025;4026 | chr2:178779255;178779254;178779253 | chr2:179643982;179643981;179643980 |
Novex-2 | 1267 | 4024;4025;4026 | chr2:178779255;178779254;178779253 | chr2:179643982;179643981;179643980 |
Novex-3 | 1313 | 4162;4163;4164 | chr2:178779255;178779254;178779253 | chr2:179643982;179643981;179643980 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.996 | N | 0.484 | 0.48 | 0.411531665326 | gnomAD-4.0.0 | 6.84211E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99418E-07 | 0 | 0 |
K/N | None | None | 0.999 | N | 0.679 | 0.37 | 0.250579442822 | gnomAD-4.0.0 | 6.84239E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15945E-05 | 0 |
K/Q | None | None | 0.999 | N | 0.669 | 0.482 | 0.289474373501 | gnomAD-4.0.0 | 6.84211E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99418E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7468 | likely_pathogenic | 0.7812 | pathogenic | -0.41 | Destabilizing | 0.998 | D | 0.579 | neutral | None | None | None | None | I |
K/C | 0.8872 | likely_pathogenic | 0.9053 | pathogenic | -0.613 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
K/D | 0.9368 | likely_pathogenic | 0.9465 | pathogenic | -0.682 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
K/E | 0.5495 | ambiguous | 0.5787 | pathogenic | -0.621 | Destabilizing | 0.996 | D | 0.484 | neutral | N | 0.502574004 | None | None | I |
K/F | 0.9421 | likely_pathogenic | 0.952 | pathogenic | -0.533 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
K/G | 0.8765 | likely_pathogenic | 0.8905 | pathogenic | -0.716 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
K/H | 0.4848 | ambiguous | 0.5319 | ambiguous | -1.2 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
K/I | 0.6412 | likely_pathogenic | 0.6693 | pathogenic | 0.356 | Stabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
K/L | 0.6789 | likely_pathogenic | 0.7134 | pathogenic | 0.356 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
K/M | 0.5416 | ambiguous | 0.5714 | pathogenic | 0.492 | Stabilizing | 1.0 | D | 0.751 | deleterious | D | 0.542184192 | None | None | I |
K/N | 0.8197 | likely_pathogenic | 0.8428 | pathogenic | -0.474 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | N | 0.512471889 | None | None | I |
K/P | 0.985 | likely_pathogenic | 0.9882 | pathogenic | 0.131 | Stabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | I |
K/Q | 0.2337 | likely_benign | 0.2582 | benign | -0.728 | Destabilizing | 0.999 | D | 0.669 | neutral | N | 0.505863885 | None | None | I |
K/R | 0.0935 | likely_benign | 0.0991 | benign | -0.421 | Destabilizing | 0.64 | D | 0.341 | neutral | N | 0.458147416 | None | None | I |
K/S | 0.797 | likely_pathogenic | 0.825 | pathogenic | -1.027 | Destabilizing | 0.998 | D | 0.556 | neutral | None | None | None | None | I |
K/T | 0.4623 | ambiguous | 0.4947 | ambiguous | -0.785 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | N | 0.506712461 | None | None | I |
K/V | 0.6001 | likely_pathogenic | 0.6297 | pathogenic | 0.131 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
K/W | 0.9349 | likely_pathogenic | 0.9469 | pathogenic | -0.465 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | I |
K/Y | 0.8836 | likely_pathogenic | 0.9009 | pathogenic | -0.062 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.