Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1317 | 4174;4175;4176 | chr2:178779243;178779242;178779241 | chr2:179643970;179643969;179643968 |
N2AB | 1317 | 4174;4175;4176 | chr2:178779243;178779242;178779241 | chr2:179643970;179643969;179643968 |
N2A | 1317 | 4174;4175;4176 | chr2:178779243;178779242;178779241 | chr2:179643970;179643969;179643968 |
N2B | 1271 | 4036;4037;4038 | chr2:178779243;178779242;178779241 | chr2:179643970;179643969;179643968 |
Novex-1 | 1271 | 4036;4037;4038 | chr2:178779243;178779242;178779241 | chr2:179643970;179643969;179643968 |
Novex-2 | 1271 | 4036;4037;4038 | chr2:178779243;178779242;178779241 | chr2:179643970;179643969;179643968 |
Novex-3 | 1317 | 4174;4175;4176 | chr2:178779243;178779242;178779241 | chr2:179643970;179643969;179643968 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs775768014 | None | 0.998 | N | 0.469 | 0.434 | 0.676397002788 | gnomAD-4.0.0 | 1.36852E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.319E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.7128 | likely_pathogenic | 0.7355 | pathogenic | -0.278 | Destabilizing | 0.584 | D | 0.485 | neutral | None | None | None | None | I |
Y/C | 0.3838 | ambiguous | 0.3843 | ambiguous | 0.082 | Stabilizing | 0.998 | D | 0.469 | neutral | N | 0.509792889 | None | None | I |
Y/D | 0.5838 | likely_pathogenic | 0.5777 | pathogenic | 0.671 | Stabilizing | 0.719 | D | 0.522 | neutral | N | 0.463333782 | None | None | I |
Y/E | 0.7865 | likely_pathogenic | 0.8014 | pathogenic | 0.638 | Stabilizing | 0.737 | D | 0.517 | neutral | None | None | None | None | I |
Y/F | 0.112 | likely_benign | 0.1153 | benign | -0.263 | Destabilizing | 0.912 | D | 0.457 | neutral | N | 0.491848464 | None | None | I |
Y/G | 0.7812 | likely_pathogenic | 0.7953 | pathogenic | -0.403 | Destabilizing | 0.737 | D | 0.539 | neutral | None | None | None | None | I |
Y/H | 0.2856 | likely_benign | 0.2935 | benign | 0.337 | Stabilizing | 0.016 | N | 0.288 | neutral | N | 0.494514319 | None | None | I |
Y/I | 0.5841 | likely_pathogenic | 0.6019 | pathogenic | 0.007 | Stabilizing | 0.932 | D | 0.487 | neutral | None | None | None | None | I |
Y/K | 0.7236 | likely_pathogenic | 0.7375 | pathogenic | 0.25 | Stabilizing | 0.037 | N | 0.289 | neutral | None | None | None | None | I |
Y/L | 0.5926 | likely_pathogenic | 0.6187 | pathogenic | 0.007 | Stabilizing | 0.85 | D | 0.445 | neutral | None | None | None | None | I |
Y/M | 0.6792 | likely_pathogenic | 0.7029 | pathogenic | -0.115 | Destabilizing | 0.993 | D | 0.459 | neutral | None | None | None | None | I |
Y/N | 0.2367 | likely_benign | 0.2392 | benign | -0.003 | Destabilizing | 0.064 | N | 0.334 | neutral | N | 0.402888413 | None | None | I |
Y/P | 0.9611 | likely_pathogenic | 0.9702 | pathogenic | -0.07 | Destabilizing | 0.932 | D | 0.517 | neutral | None | None | None | None | I |
Y/Q | 0.6541 | likely_pathogenic | 0.6841 | pathogenic | 0.08 | Stabilizing | 0.872 | D | 0.493 | neutral | None | None | None | None | I |
Y/R | 0.6089 | likely_pathogenic | 0.622 | pathogenic | 0.346 | Stabilizing | 0.021 | N | 0.361 | neutral | None | None | None | None | I |
Y/S | 0.3036 | likely_benign | 0.3166 | benign | -0.283 | Destabilizing | 0.166 | N | 0.332 | neutral | N | 0.455831742 | None | None | I |
Y/T | 0.5357 | ambiguous | 0.568 | pathogenic | -0.233 | Destabilizing | 0.584 | D | 0.487 | neutral | None | None | None | None | I |
Y/V | 0.5061 | ambiguous | 0.5318 | ambiguous | -0.07 | Destabilizing | 0.932 | D | 0.512 | neutral | None | None | None | None | I |
Y/W | 0.6103 | likely_pathogenic | 0.622 | pathogenic | -0.539 | Destabilizing | 0.998 | D | 0.447 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.