Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1326 | 4201;4202;4203 | chr2:178779106;178779105;178779104 | chr2:179643833;179643832;179643831 |
N2AB | 1326 | 4201;4202;4203 | chr2:178779106;178779105;178779104 | chr2:179643833;179643832;179643831 |
N2A | 1326 | 4201;4202;4203 | chr2:178779106;178779105;178779104 | chr2:179643833;179643832;179643831 |
N2B | 1280 | 4063;4064;4065 | chr2:178779106;178779105;178779104 | chr2:179643833;179643832;179643831 |
Novex-1 | 1280 | 4063;4064;4065 | chr2:178779106;178779105;178779104 | chr2:179643833;179643832;179643831 |
Novex-2 | 1280 | 4063;4064;4065 | chr2:178779106;178779105;178779104 | chr2:179643833;179643832;179643831 |
Novex-3 | 1326 | 4201;4202;4203 | chr2:178779106;178779105;178779104 | chr2:179643833;179643832;179643831 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs2092529339 | None | 0.999 | D | 0.615 | 0.529 | 0.479593739615 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.54E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs2092529339 | None | 0.999 | D | 0.615 | 0.529 | 0.479593739615 | gnomAD-4.0.0 | 2.02974E-06 | None | None | None | None | N | None | 0 | 6.14855E-05 | None | 0 | 0 | None | 0 | 0 | 1.20489E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9928 | likely_pathogenic | 0.9933 | pathogenic | -1.195 | Destabilizing | 0.999 | D | 0.706 | prob.neutral | None | None | None | None | N |
K/C | 0.9799 | likely_pathogenic | 0.9839 | pathogenic | -1.252 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
K/D | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -0.845 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
K/E | 0.9926 | likely_pathogenic | 0.9937 | pathogenic | -0.626 | Destabilizing | 0.999 | D | 0.615 | neutral | D | 0.717145636 | None | None | N |
K/F | 0.9981 | likely_pathogenic | 0.9983 | pathogenic | -0.742 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
K/G | 0.9978 | likely_pathogenic | 0.9979 | pathogenic | -1.645 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
K/H | 0.9264 | likely_pathogenic | 0.9365 | pathogenic | -1.897 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
K/I | 0.9834 | likely_pathogenic | 0.9864 | pathogenic | 0.034 | Stabilizing | 1.0 | D | 0.877 | deleterious | D | 0.599276767 | None | None | N |
K/L | 0.9729 | likely_pathogenic | 0.9775 | pathogenic | 0.034 | Stabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
K/M | 0.9672 | likely_pathogenic | 0.9715 | pathogenic | -0.118 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
K/N | 0.9977 | likely_pathogenic | 0.998 | pathogenic | -1.209 | Destabilizing | 1.0 | D | 0.753 | deleterious | D | 0.595311666 | None | None | N |
K/P | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -0.349 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
K/Q | 0.9266 | likely_pathogenic | 0.9377 | pathogenic | -1.077 | Destabilizing | 1.0 | D | 0.741 | deleterious | D | 0.594464314 | None | None | N |
K/R | 0.2547 | likely_benign | 0.2792 | benign | -0.885 | Destabilizing | 0.999 | D | 0.641 | neutral | N | 0.461271391 | None | None | N |
K/S | 0.9975 | likely_pathogenic | 0.9976 | pathogenic | -1.923 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
K/T | 0.9908 | likely_pathogenic | 0.9907 | pathogenic | -1.447 | Destabilizing | 1.0 | D | 0.792 | deleterious | D | 0.6276967 | None | None | N |
K/V | 0.9691 | likely_pathogenic | 0.9724 | pathogenic | -0.349 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
K/W | 0.9971 | likely_pathogenic | 0.9976 | pathogenic | -0.642 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
K/Y | 0.9912 | likely_pathogenic | 0.9926 | pathogenic | -0.306 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.