Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1331 | 4216;4217;4218 | chr2:178779091;178779090;178779089 | chr2:179643818;179643817;179643816 |
N2AB | 1331 | 4216;4217;4218 | chr2:178779091;178779090;178779089 | chr2:179643818;179643817;179643816 |
N2A | 1331 | 4216;4217;4218 | chr2:178779091;178779090;178779089 | chr2:179643818;179643817;179643816 |
N2B | 1285 | 4078;4079;4080 | chr2:178779091;178779090;178779089 | chr2:179643818;179643817;179643816 |
Novex-1 | 1285 | 4078;4079;4080 | chr2:178779091;178779090;178779089 | chr2:179643818;179643817;179643816 |
Novex-2 | 1285 | 4078;4079;4080 | chr2:178779091;178779090;178779089 | chr2:179643818;179643817;179643816 |
Novex-3 | 1331 | 4216;4217;4218 | chr2:178779091;178779090;178779089 | chr2:179643818;179643817;179643816 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs2092527820 | None | 0.722 | D | 0.539 | 0.531 | 0.761228310999 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9899 | likely_pathogenic | 0.9892 | pathogenic | -2.352 | Highly Destabilizing | 0.415 | N | 0.502 | neutral | None | None | None | None | N |
I/C | 0.9939 | likely_pathogenic | 0.9932 | pathogenic | -1.407 | Destabilizing | 0.996 | D | 0.625 | neutral | None | None | None | None | N |
I/D | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -2.94 | Highly Destabilizing | 0.987 | D | 0.735 | prob.delet. | None | None | None | None | N |
I/E | 0.9979 | likely_pathogenic | 0.9974 | pathogenic | -2.7 | Highly Destabilizing | 0.961 | D | 0.701 | prob.neutral | None | None | None | None | N |
I/F | 0.9143 | likely_pathogenic | 0.8866 | pathogenic | -1.55 | Destabilizing | 0.82 | D | 0.531 | neutral | D | 0.586467229 | None | None | N |
I/G | 0.9981 | likely_pathogenic | 0.998 | pathogenic | -2.844 | Highly Destabilizing | 0.961 | D | 0.684 | prob.neutral | None | None | None | None | N |
I/H | 0.9987 | likely_pathogenic | 0.9982 | pathogenic | -2.272 | Highly Destabilizing | 0.996 | D | 0.727 | prob.delet. | None | None | None | None | N |
I/K | 0.9953 | likely_pathogenic | 0.9942 | pathogenic | -1.781 | Destabilizing | 0.961 | D | 0.692 | prob.neutral | None | None | None | None | N |
I/L | 0.3507 | ambiguous | 0.3232 | benign | -0.909 | Destabilizing | 0.003 | N | 0.165 | neutral | N | 0.49417038 | None | None | N |
I/M | 0.5219 | ambiguous | 0.4658 | ambiguous | -0.758 | Destabilizing | 0.901 | D | 0.571 | neutral | D | 0.589353165 | None | None | N |
I/N | 0.9954 | likely_pathogenic | 0.994 | pathogenic | -2.209 | Highly Destabilizing | 0.983 | D | 0.741 | deleterious | D | 0.699164501 | None | None | N |
I/P | 0.9979 | likely_pathogenic | 0.9975 | pathogenic | -1.376 | Destabilizing | 0.987 | D | 0.741 | deleterious | None | None | None | None | N |
I/Q | 0.9961 | likely_pathogenic | 0.9951 | pathogenic | -2.072 | Highly Destabilizing | 0.987 | D | 0.741 | deleterious | None | None | None | None | N |
I/R | 0.9928 | likely_pathogenic | 0.9915 | pathogenic | -1.59 | Destabilizing | 0.961 | D | 0.741 | deleterious | None | None | None | None | N |
I/S | 0.9959 | likely_pathogenic | 0.9952 | pathogenic | -2.783 | Highly Destabilizing | 0.901 | D | 0.611 | neutral | D | 0.636881975 | None | None | N |
I/T | 0.9934 | likely_pathogenic | 0.9926 | pathogenic | -2.402 | Highly Destabilizing | 0.722 | D | 0.539 | neutral | D | 0.715211934 | None | None | N |
I/V | 0.3312 | likely_benign | 0.3494 | ambiguous | -1.376 | Destabilizing | 0.003 | N | 0.158 | neutral | N | 0.506948187 | None | None | N |
I/W | 0.9977 | likely_pathogenic | 0.9968 | pathogenic | -1.915 | Destabilizing | 0.996 | D | 0.731 | prob.delet. | None | None | None | None | N |
I/Y | 0.9927 | likely_pathogenic | 0.9905 | pathogenic | -1.582 | Destabilizing | 0.961 | D | 0.659 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.