Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1339 | 4240;4241;4242 | chr2:178779067;178779066;178779065 | chr2:179643794;179643793;179643792 |
N2AB | 1339 | 4240;4241;4242 | chr2:178779067;178779066;178779065 | chr2:179643794;179643793;179643792 |
N2A | 1339 | 4240;4241;4242 | chr2:178779067;178779066;178779065 | chr2:179643794;179643793;179643792 |
N2B | 1293 | 4102;4103;4104 | chr2:178779067;178779066;178779065 | chr2:179643794;179643793;179643792 |
Novex-1 | 1293 | 4102;4103;4104 | chr2:178779067;178779066;178779065 | chr2:179643794;179643793;179643792 |
Novex-2 | 1293 | 4102;4103;4104 | chr2:178779067;178779066;178779065 | chr2:179643794;179643793;179643792 |
Novex-3 | 1339 | 4240;4241;4242 | chr2:178779067;178779066;178779065 | chr2:179643794;179643793;179643792 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs1561323191 | None | 0.012 | N | 0.126 | 0.235 | 0.434045841721 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.88 | likely_pathogenic | 0.8925 | pathogenic | -2.666 | Highly Destabilizing | 0.373 | N | 0.395 | neutral | None | None | None | None | I |
M/C | 0.9517 | likely_pathogenic | 0.9554 | pathogenic | -1.525 | Destabilizing | 0.996 | D | 0.539 | neutral | None | None | None | None | I |
M/D | 0.9948 | likely_pathogenic | 0.9952 | pathogenic | -1.314 | Destabilizing | 0.984 | D | 0.615 | neutral | None | None | None | None | I |
M/E | 0.943 | likely_pathogenic | 0.9494 | pathogenic | -1.221 | Destabilizing | 0.953 | D | 0.583 | neutral | None | None | None | None | I |
M/F | 0.6828 | likely_pathogenic | 0.7167 | pathogenic | -1.387 | Destabilizing | 0.742 | D | 0.495 | neutral | None | None | None | None | I |
M/G | 0.9698 | likely_pathogenic | 0.9738 | pathogenic | -3.05 | Highly Destabilizing | 0.854 | D | 0.588 | neutral | None | None | None | None | I |
M/H | 0.9641 | likely_pathogenic | 0.9718 | pathogenic | -2.135 | Highly Destabilizing | 0.996 | D | 0.573 | neutral | None | None | None | None | I |
M/I | 0.6592 | likely_pathogenic | 0.6961 | pathogenic | -1.601 | Destabilizing | 0.012 | N | 0.126 | neutral | N | 0.399463836 | None | None | I |
M/K | 0.8257 | likely_pathogenic | 0.8546 | pathogenic | -1.217 | Destabilizing | 0.815 | D | 0.513 | neutral | N | 0.502714098 | None | None | I |
M/L | 0.3756 | ambiguous | 0.4257 | ambiguous | -1.601 | Destabilizing | 0.078 | N | 0.241 | neutral | N | 0.442104984 | None | None | I |
M/N | 0.9618 | likely_pathogenic | 0.966 | pathogenic | -1.118 | Destabilizing | 0.984 | D | 0.587 | neutral | None | None | None | None | I |
M/P | 0.992 | likely_pathogenic | 0.993 | pathogenic | -1.935 | Destabilizing | 0.984 | D | 0.595 | neutral | None | None | None | None | I |
M/Q | 0.7966 | likely_pathogenic | 0.8208 | pathogenic | -1.107 | Destabilizing | 0.984 | D | 0.497 | neutral | None | None | None | None | I |
M/R | 0.8462 | likely_pathogenic | 0.8797 | pathogenic | -0.834 | Destabilizing | 0.939 | D | 0.563 | neutral | N | 0.514895807 | None | None | I |
M/S | 0.9352 | likely_pathogenic | 0.943 | pathogenic | -1.786 | Destabilizing | 0.742 | D | 0.465 | neutral | None | None | None | None | I |
M/T | 0.7631 | likely_pathogenic | 0.7952 | pathogenic | -1.577 | Destabilizing | 0.684 | D | 0.467 | neutral | N | 0.486443687 | None | None | I |
M/V | 0.2569 | likely_benign | 0.2886 | benign | -1.935 | Destabilizing | 0.003 | N | 0.109 | neutral | N | 0.466329945 | None | None | I |
M/W | 0.9411 | likely_pathogenic | 0.9529 | pathogenic | -1.338 | Destabilizing | 0.996 | D | 0.545 | neutral | None | None | None | None | I |
M/Y | 0.9295 | likely_pathogenic | 0.9417 | pathogenic | -1.474 | Destabilizing | 0.953 | D | 0.562 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.