Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1357 | 4294;4295;4296 | chr2:178779013;178779012;178779011 | chr2:179643740;179643739;179643738 |
N2AB | 1357 | 4294;4295;4296 | chr2:178779013;178779012;178779011 | chr2:179643740;179643739;179643738 |
N2A | 1357 | 4294;4295;4296 | chr2:178779013;178779012;178779011 | chr2:179643740;179643739;179643738 |
N2B | 1311 | 4156;4157;4158 | chr2:178779013;178779012;178779011 | chr2:179643740;179643739;179643738 |
Novex-1 | 1311 | 4156;4157;4158 | chr2:178779013;178779012;178779011 | chr2:179643740;179643739;179643738 |
Novex-2 | 1311 | 4156;4157;4158 | chr2:178779013;178779012;178779011 | chr2:179643740;179643739;179643738 |
Novex-3 | 1357 | 4294;4295;4296 | chr2:178779013;178779012;178779011 | chr2:179643740;179643739;179643738 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 1.0 | N | 0.676 | 0.506 | 0.391930172978 | gnomAD-4.0.0 | 1.59078E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8569E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.334 | likely_benign | 0.3235 | benign | -0.395 | Destabilizing | 0.999 | D | 0.675 | neutral | N | 0.452450318 | None | None | N |
E/C | 0.9782 | likely_pathogenic | 0.9776 | pathogenic | -0.131 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/D | 0.3549 | ambiguous | 0.3572 | ambiguous | -0.344 | Destabilizing | 0.999 | D | 0.475 | neutral | N | 0.443016901 | None | None | N |
E/F | 0.9804 | likely_pathogenic | 0.9813 | pathogenic | -0.292 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/G | 0.4396 | ambiguous | 0.4375 | ambiguous | -0.581 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | N | 0.460770558 | None | None | N |
E/H | 0.8832 | likely_pathogenic | 0.8819 | pathogenic | 0.056 | Stabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/I | 0.8324 | likely_pathogenic | 0.8188 | pathogenic | 0.06 | Stabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
E/K | 0.4847 | ambiguous | 0.4681 | ambiguous | 0.212 | Stabilizing | 0.999 | D | 0.628 | neutral | N | 0.444255223 | None | None | N |
E/L | 0.8823 | likely_pathogenic | 0.8819 | pathogenic | 0.06 | Stabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
E/M | 0.8646 | likely_pathogenic | 0.864 | pathogenic | 0.104 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/N | 0.7151 | likely_pathogenic | 0.7118 | pathogenic | -0.066 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/P | 0.945 | likely_pathogenic | 0.947 | pathogenic | -0.072 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/Q | 0.3437 | ambiguous | 0.3384 | benign | -0.034 | Destabilizing | 1.0 | D | 0.637 | neutral | N | 0.456580409 | None | None | N |
E/R | 0.6877 | likely_pathogenic | 0.6849 | pathogenic | 0.483 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/S | 0.4492 | ambiguous | 0.4453 | ambiguous | -0.243 | Destabilizing | 0.999 | D | 0.682 | prob.neutral | None | None | None | None | N |
E/T | 0.6134 | likely_pathogenic | 0.5897 | pathogenic | -0.092 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/V | 0.6458 | likely_pathogenic | 0.6346 | pathogenic | -0.072 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | D | 0.53896913 | None | None | N |
E/W | 0.9917 | likely_pathogenic | 0.9922 | pathogenic | -0.152 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
E/Y | 0.9587 | likely_pathogenic | 0.9611 | pathogenic | -0.057 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.