Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13688 | 41287;41288;41289 | chr2:178636665;178636664;178636663 | chr2:179501392;179501391;179501390 |
N2AB | 12047 | 36364;36365;36366 | chr2:178636665;178636664;178636663 | chr2:179501392;179501391;179501390 |
N2A | 11120 | 33583;33584;33585 | chr2:178636665;178636664;178636663 | chr2:179501392;179501391;179501390 |
N2B | 4623 | 14092;14093;14094 | chr2:178636665;178636664;178636663 | chr2:179501392;179501391;179501390 |
Novex-1 | 4748 | 14467;14468;14469 | chr2:178636665;178636664;178636663 | chr2:179501392;179501391;179501390 |
Novex-2 | 4815 | 14668;14669;14670 | chr2:178636665;178636664;178636663 | chr2:179501392;179501391;179501390 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs2060476554 | None | 0.959 | N | 0.722 | 0.415 | 0.535152128566 | gnomAD-4.0.0 | 1.59222E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
E/K | None | None | 0.116 | N | 0.298 | 0.164 | 0.315314060047 | gnomAD-4.0.0 | 6.84396E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99638E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6174 | likely_pathogenic | 0.6454 | pathogenic | -0.909 | Destabilizing | 0.959 | D | 0.661 | neutral | N | 0.512631919 | None | None | N |
E/C | 0.9936 | likely_pathogenic | 0.9957 | pathogenic | -0.433 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
E/D | 0.5543 | ambiguous | 0.5671 | pathogenic | -0.665 | Destabilizing | 0.828 | D | 0.567 | neutral | N | 0.513768069 | None | None | N |
E/F | 0.992 | likely_pathogenic | 0.9953 | pathogenic | -0.255 | Destabilizing | 0.999 | D | 0.816 | deleterious | None | None | None | None | N |
E/G | 0.6077 | likely_pathogenic | 0.7281 | pathogenic | -1.236 | Destabilizing | 0.959 | D | 0.722 | prob.delet. | N | 0.499527097 | None | None | N |
E/H | 0.9661 | likely_pathogenic | 0.9773 | pathogenic | -0.326 | Destabilizing | 0.995 | D | 0.603 | neutral | None | None | None | None | N |
E/I | 0.9542 | likely_pathogenic | 0.9643 | pathogenic | -0.023 | Destabilizing | 0.999 | D | 0.806 | deleterious | None | None | None | None | N |
E/K | 0.7961 | likely_pathogenic | 0.831 | pathogenic | -0.245 | Destabilizing | 0.116 | N | 0.298 | neutral | N | 0.488120565 | None | None | N |
E/L | 0.9526 | likely_pathogenic | 0.9633 | pathogenic | -0.023 | Destabilizing | 0.984 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/M | 0.9467 | likely_pathogenic | 0.9567 | pathogenic | 0.283 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
E/N | 0.8227 | likely_pathogenic | 0.8481 | pathogenic | -0.802 | Destabilizing | 0.293 | N | 0.395 | neutral | None | None | None | None | N |
E/P | 0.7941 | likely_pathogenic | 0.7974 | pathogenic | -0.298 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/Q | 0.6004 | likely_pathogenic | 0.6346 | pathogenic | -0.687 | Destabilizing | 0.959 | D | 0.585 | neutral | N | 0.515955965 | None | None | N |
E/R | 0.9164 | likely_pathogenic | 0.9372 | pathogenic | 0.068 | Stabilizing | 0.939 | D | 0.594 | neutral | None | None | None | None | N |
E/S | 0.7787 | likely_pathogenic | 0.8186 | pathogenic | -1.07 | Destabilizing | 0.969 | D | 0.59 | neutral | None | None | None | None | N |
E/T | 0.8128 | likely_pathogenic | 0.8504 | pathogenic | -0.788 | Destabilizing | 0.969 | D | 0.669 | neutral | None | None | None | None | N |
E/V | 0.8607 | likely_pathogenic | 0.8833 | pathogenic | -0.298 | Destabilizing | 0.994 | D | 0.736 | prob.delet. | N | 0.513862917 | None | None | N |
E/W | 0.9985 | likely_pathogenic | 0.9993 | pathogenic | 0.1 | Stabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
E/Y | 0.9869 | likely_pathogenic | 0.991 | pathogenic | 0.03 | Stabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.