Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13689 | 41290;41291;41292 | chr2:178636662;178636661;178636660 | chr2:179501389;179501388;179501387 |
N2AB | 12048 | 36367;36368;36369 | chr2:178636662;178636661;178636660 | chr2:179501389;179501388;179501387 |
N2A | 11121 | 33586;33587;33588 | chr2:178636662;178636661;178636660 | chr2:179501389;179501388;179501387 |
N2B | 4624 | 14095;14096;14097 | chr2:178636662;178636661;178636660 | chr2:179501389;179501388;179501387 |
Novex-1 | 4749 | 14470;14471;14472 | chr2:178636662;178636661;178636660 | chr2:179501389;179501388;179501387 |
Novex-2 | 4816 | 14671;14672;14673 | chr2:178636662;178636661;178636660 | chr2:179501389;179501388;179501387 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs1316196026 | -0.961 | 0.934 | D | 0.473 | 0.272 | 0.530309751445 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
I/F | rs1316196026 | -0.961 | 0.934 | D | 0.473 | 0.272 | 0.530309751445 | gnomAD-4.0.0 | 1.16346E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.43942E-05 | 0 | 1.65728E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9626 | likely_pathogenic | 0.9658 | pathogenic | -2.348 | Highly Destabilizing | 0.688 | D | 0.404 | neutral | None | None | None | None | I |
I/C | 0.9882 | likely_pathogenic | 0.9889 | pathogenic | -1.577 | Destabilizing | 0.998 | D | 0.569 | neutral | None | None | None | None | I |
I/D | 0.9988 | likely_pathogenic | 0.9989 | pathogenic | -2.497 | Highly Destabilizing | 0.991 | D | 0.646 | neutral | None | None | None | None | I |
I/E | 0.9939 | likely_pathogenic | 0.995 | pathogenic | -2.287 | Highly Destabilizing | 0.974 | D | 0.628 | neutral | None | None | None | None | I |
I/F | 0.7766 | likely_pathogenic | 0.8163 | pathogenic | -1.33 | Destabilizing | 0.934 | D | 0.473 | neutral | D | 0.562183336 | None | None | I |
I/G | 0.9949 | likely_pathogenic | 0.9945 | pathogenic | -2.874 | Highly Destabilizing | 0.974 | D | 0.627 | neutral | None | None | None | None | I |
I/H | 0.9973 | likely_pathogenic | 0.9981 | pathogenic | -2.324 | Highly Destabilizing | 0.998 | D | 0.638 | neutral | None | None | None | None | I |
I/K | 0.9899 | likely_pathogenic | 0.9918 | pathogenic | -1.583 | Destabilizing | 0.949 | D | 0.623 | neutral | None | None | None | None | I |
I/L | 0.1942 | likely_benign | 0.1812 | benign | -0.836 | Destabilizing | 0.002 | N | 0.15 | neutral | N | 0.391745066 | None | None | I |
I/M | 0.1221 | likely_benign | 0.1541 | benign | -0.843 | Destabilizing | 0.267 | N | 0.287 | neutral | N | 0.499196091 | None | None | I |
I/N | 0.9779 | likely_pathogenic | 0.984 | pathogenic | -1.857 | Destabilizing | 0.989 | D | 0.635 | neutral | D | 0.606077763 | None | None | I |
I/P | 0.9885 | likely_pathogenic | 0.9756 | pathogenic | -1.32 | Destabilizing | 0.991 | D | 0.644 | neutral | None | None | None | None | I |
I/Q | 0.9854 | likely_pathogenic | 0.9903 | pathogenic | -1.741 | Destabilizing | 0.974 | D | 0.634 | neutral | None | None | None | None | I |
I/R | 0.9913 | likely_pathogenic | 0.9926 | pathogenic | -1.344 | Destabilizing | 0.974 | D | 0.645 | neutral | None | None | None | None | I |
I/S | 0.985 | likely_pathogenic | 0.9879 | pathogenic | -2.563 | Highly Destabilizing | 0.891 | D | 0.559 | neutral | D | 0.540195118 | None | None | I |
I/T | 0.9787 | likely_pathogenic | 0.9837 | pathogenic | -2.213 | Highly Destabilizing | 0.801 | D | 0.456 | neutral | D | 0.562778757 | None | None | I |
I/V | 0.4194 | ambiguous | 0.4158 | ambiguous | -1.32 | Destabilizing | 0.022 | N | 0.192 | neutral | N | 0.5043865 | None | None | I |
I/W | 0.9959 | likely_pathogenic | 0.9969 | pathogenic | -1.705 | Destabilizing | 0.998 | D | 0.647 | neutral | None | None | None | None | I |
I/Y | 0.9868 | likely_pathogenic | 0.991 | pathogenic | -1.416 | Destabilizing | 0.974 | D | 0.586 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.