Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13698 | 41317;41318;41319 | chr2:178636635;178636634;178636633 | chr2:179501362;179501361;179501360 |
N2AB | 12057 | 36394;36395;36396 | chr2:178636635;178636634;178636633 | chr2:179501362;179501361;179501360 |
N2A | 11130 | 33613;33614;33615 | chr2:178636635;178636634;178636633 | chr2:179501362;179501361;179501360 |
N2B | 4633 | 14122;14123;14124 | chr2:178636635;178636634;178636633 | chr2:179501362;179501361;179501360 |
Novex-1 | 4758 | 14497;14498;14499 | chr2:178636635;178636634;178636633 | chr2:179501362;179501361;179501360 |
Novex-2 | 4825 | 14698;14699;14700 | chr2:178636635;178636634;178636633 | chr2:179501362;179501361;179501360 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs1216328116 | -0.455 | 1.0 | N | 0.605 | 0.231 | 0.414670632993 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.61E-05 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs1216328116 | -0.455 | 1.0 | N | 0.605 | 0.231 | 0.414670632993 | gnomAD-4.0.0 | 1.59219E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78133E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4962 | ambiguous | 0.4321 | ambiguous | -0.695 | Destabilizing | 0.999 | D | 0.631 | neutral | N | 0.444161385 | None | None | N |
E/C | 0.9824 | likely_pathogenic | 0.9783 | pathogenic | -0.107 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
E/D | 0.2567 | likely_benign | 0.1983 | benign | -0.374 | Destabilizing | 0.999 | D | 0.506 | neutral | N | 0.502575064 | None | None | N |
E/F | 0.9782 | likely_pathogenic | 0.9731 | pathogenic | -0.481 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
E/G | 0.4935 | ambiguous | 0.426 | ambiguous | -0.904 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | N | 0.510570465 | None | None | N |
E/H | 0.8776 | likely_pathogenic | 0.849 | pathogenic | -0.313 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/I | 0.8988 | likely_pathogenic | 0.8744 | pathogenic | -0.168 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
E/K | 0.6436 | likely_pathogenic | 0.5586 | ambiguous | 0.296 | Stabilizing | 0.999 | D | 0.613 | neutral | N | 0.497594499 | None | None | N |
E/L | 0.8943 | likely_pathogenic | 0.8723 | pathogenic | -0.168 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
E/M | 0.9104 | likely_pathogenic | 0.8868 | pathogenic | 0.07 | Stabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | N |
E/N | 0.603 | likely_pathogenic | 0.5431 | ambiguous | -0.176 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/P | 0.8834 | likely_pathogenic | 0.8466 | pathogenic | -0.325 | Destabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | N |
E/Q | 0.4189 | ambiguous | 0.392 | ambiguous | -0.122 | Destabilizing | 1.0 | D | 0.605 | neutral | N | 0.492368927 | None | None | N |
E/R | 0.7378 | likely_pathogenic | 0.6972 | pathogenic | 0.461 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/S | 0.4694 | ambiguous | 0.4147 | ambiguous | -0.314 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | N |
E/T | 0.6403 | likely_pathogenic | 0.5722 | pathogenic | -0.13 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
E/V | 0.7646 | likely_pathogenic | 0.7036 | pathogenic | -0.325 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | N | 0.444797087 | None | None | N |
E/W | 0.9931 | likely_pathogenic | 0.993 | pathogenic | -0.249 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/Y | 0.9488 | likely_pathogenic | 0.9463 | pathogenic | -0.223 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.