Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13699 | 41320;41321;41322 | chr2:178636632;178636631;178636630 | chr2:179501359;179501358;179501357 |
N2AB | 12058 | 36397;36398;36399 | chr2:178636632;178636631;178636630 | chr2:179501359;179501358;179501357 |
N2A | 11131 | 33616;33617;33618 | chr2:178636632;178636631;178636630 | chr2:179501359;179501358;179501357 |
N2B | 4634 | 14125;14126;14127 | chr2:178636632;178636631;178636630 | chr2:179501359;179501358;179501357 |
Novex-1 | 4759 | 14500;14501;14502 | chr2:178636632;178636631;178636630 | chr2:179501359;179501358;179501357 |
Novex-2 | 4826 | 14701;14702;14703 | chr2:178636632;178636631;178636630 | chr2:179501359;179501358;179501357 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/I | None | None | 0.024 | N | 0.263 | 0.173 | 0.245660935333 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
F/L | None | None | 0.01 | N | 0.222 | 0.168 | 0.0482279557977 | gnomAD-4.0.0 | 1.36874E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79922E-06 | 0 | 0 |
F/S | None | None | None | N | 0.171 | 0.152 | 0.227934060464 | gnomAD-4.0.0 | 1.36872E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79922E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.2074 | likely_benign | 0.1494 | benign | -2.559 | Highly Destabilizing | 0.003 | N | 0.197 | neutral | None | None | None | None | I |
F/C | 0.5185 | ambiguous | 0.3059 | benign | -1.836 | Destabilizing | 0.295 | N | 0.309 | neutral | N | 0.451421669 | None | None | I |
F/D | 0.6538 | likely_pathogenic | 0.6477 | pathogenic | -1.602 | Destabilizing | 0.016 | N | 0.333 | neutral | None | None | None | None | I |
F/E | 0.7164 | likely_pathogenic | 0.6846 | pathogenic | -1.46 | Destabilizing | 0.007 | N | 0.345 | neutral | None | None | None | None | I |
F/G | 0.4958 | ambiguous | 0.4484 | ambiguous | -2.939 | Highly Destabilizing | 0.003 | N | 0.267 | neutral | None | None | None | None | I |
F/H | 0.5516 | ambiguous | 0.5406 | ambiguous | -1.271 | Destabilizing | 0.356 | N | 0.295 | neutral | None | None | None | None | I |
F/I | 0.2819 | likely_benign | 0.1935 | benign | -1.375 | Destabilizing | 0.024 | N | 0.263 | neutral | N | 0.416316826 | None | None | I |
F/K | 0.7829 | likely_pathogenic | 0.8012 | pathogenic | -1.577 | Destabilizing | 0.016 | N | 0.342 | neutral | None | None | None | None | I |
F/L | 0.8223 | likely_pathogenic | 0.7641 | pathogenic | -1.375 | Destabilizing | 0.01 | N | 0.222 | neutral | N | 0.423262637 | None | None | I |
F/M | 0.4145 | ambiguous | 0.3493 | ambiguous | -1.298 | Destabilizing | 0.628 | D | 0.251 | neutral | None | None | None | None | I |
F/N | 0.3313 | likely_benign | 0.3031 | benign | -1.713 | Destabilizing | 0.016 | N | 0.328 | neutral | None | None | None | None | I |
F/P | 0.9472 | likely_pathogenic | 0.8679 | pathogenic | -1.77 | Destabilizing | 0.072 | N | 0.373 | neutral | None | None | None | None | I |
F/Q | 0.6721 | likely_pathogenic | 0.6475 | pathogenic | -1.764 | Destabilizing | 0.072 | N | 0.377 | neutral | None | None | None | None | I |
F/R | 0.7639 | likely_pathogenic | 0.7588 | pathogenic | -0.978 | Destabilizing | 0.072 | N | 0.375 | neutral | None | None | None | None | I |
F/S | 0.1558 | likely_benign | 0.115 | benign | -2.585 | Highly Destabilizing | None | N | 0.171 | neutral | N | 0.397851314 | None | None | I |
F/T | 0.2216 | likely_benign | 0.1597 | benign | -2.343 | Highly Destabilizing | 0.007 | N | 0.258 | neutral | None | None | None | None | I |
F/V | 0.2241 | likely_benign | 0.1568 | benign | -1.77 | Destabilizing | 0.024 | N | 0.307 | neutral | N | 0.39651831 | None | None | I |
F/W | 0.5648 | likely_pathogenic | 0.5782 | pathogenic | -0.351 | Destabilizing | 0.628 | D | 0.305 | neutral | None | None | None | None | I |
F/Y | 0.1671 | likely_benign | 0.1652 | benign | -0.623 | Destabilizing | 0.047 | N | 0.335 | neutral | N | 0.420138764 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.