Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1370 | 4333;4334;4335 | chr2:178778974;178778973;178778972 | chr2:179643701;179643700;179643699 |
N2AB | 1370 | 4333;4334;4335 | chr2:178778974;178778973;178778972 | chr2:179643701;179643700;179643699 |
N2A | 1370 | 4333;4334;4335 | chr2:178778974;178778973;178778972 | chr2:179643701;179643700;179643699 |
N2B | 1324 | 4195;4196;4197 | chr2:178778974;178778973;178778972 | chr2:179643701;179643700;179643699 |
Novex-1 | 1324 | 4195;4196;4197 | chr2:178778974;178778973;178778972 | chr2:179643701;179643700;179643699 |
Novex-2 | 1324 | 4195;4196;4197 | chr2:178778974;178778973;178778972 | chr2:179643701;179643700;179643699 |
Novex-3 | 1370 | 4333;4334;4335 | chr2:178778974;178778973;178778972 | chr2:179643701;179643700;179643699 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1453568535 | 0.172 | 0.98 | N | 0.465 | 0.335 | 0.379366414296 | gnomAD-2.1.1 | 7.98E-06 | None | None | None | None | I | None | 0 | 0 | None | 1.98847E-04 | 0 | None | 0 | None | 0 | 0 | 0 |
K/E | rs1453568535 | 0.172 | 0.98 | N | 0.465 | 0.335 | 0.379366414296 | gnomAD-4.0.0 | 3.18169E-06 | None | None | None | None | I | None | 0 | 0 | None | 9.5338E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.823 | likely_pathogenic | 0.8124 | pathogenic | -0.02 | Destabilizing | 0.985 | D | 0.491 | neutral | None | None | None | None | I |
K/C | 0.9084 | likely_pathogenic | 0.901 | pathogenic | -0.449 | Destabilizing | 1.0 | D | 0.604 | neutral | None | None | None | None | I |
K/D | 0.9617 | likely_pathogenic | 0.967 | pathogenic | -0.268 | Destabilizing | 0.998 | D | 0.525 | neutral | None | None | None | None | I |
K/E | 0.7378 | likely_pathogenic | 0.7351 | pathogenic | -0.283 | Destabilizing | 0.98 | D | 0.465 | neutral | N | 0.406739243 | None | None | I |
K/F | 0.9658 | likely_pathogenic | 0.9646 | pathogenic | -0.388 | Destabilizing | 0.996 | D | 0.595 | neutral | None | None | None | None | I |
K/G | 0.91 | likely_pathogenic | 0.9045 | pathogenic | -0.14 | Destabilizing | 0.993 | D | 0.559 | neutral | None | None | None | None | I |
K/H | 0.5868 | likely_pathogenic | 0.6135 | pathogenic | -0.253 | Destabilizing | 1.0 | D | 0.549 | neutral | None | None | None | None | I |
K/I | 0.8634 | likely_pathogenic | 0.8555 | pathogenic | 0.211 | Stabilizing | 0.989 | D | 0.576 | neutral | N | 0.410282928 | None | None | I |
K/L | 0.7886 | likely_pathogenic | 0.7943 | pathogenic | 0.211 | Stabilizing | 0.171 | N | 0.447 | neutral | None | None | None | None | I |
K/M | 0.693 | likely_pathogenic | 0.6803 | pathogenic | -0.099 | Destabilizing | 0.996 | D | 0.543 | neutral | None | None | None | None | I |
K/N | 0.8765 | likely_pathogenic | 0.8877 | pathogenic | 0.01 | Stabilizing | 0.997 | D | 0.456 | neutral | N | 0.452408785 | None | None | I |
K/P | 0.9863 | likely_pathogenic | 0.9858 | pathogenic | 0.157 | Stabilizing | 0.999 | D | 0.545 | neutral | None | None | None | None | I |
K/Q | 0.3774 | ambiguous | 0.397 | ambiguous | -0.134 | Destabilizing | 0.994 | D | 0.485 | neutral | N | 0.363849504 | None | None | I |
K/R | 0.1146 | likely_benign | 0.1194 | benign | -0.1 | Destabilizing | 0.265 | N | 0.281 | neutral | N | 0.444774559 | None | None | I |
K/S | 0.8759 | likely_pathogenic | 0.8788 | pathogenic | -0.362 | Destabilizing | 0.971 | D | 0.451 | neutral | None | None | None | None | I |
K/T | 0.7276 | likely_pathogenic | 0.7034 | pathogenic | -0.261 | Destabilizing | 0.4 | N | 0.363 | neutral | N | 0.483200362 | None | None | I |
K/V | 0.8204 | likely_pathogenic | 0.8042 | pathogenic | 0.157 | Stabilizing | 0.971 | D | 0.591 | neutral | None | None | None | None | I |
K/W | 0.9597 | likely_pathogenic | 0.9579 | pathogenic | -0.488 | Destabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | I |
K/Y | 0.9045 | likely_pathogenic | 0.905 | pathogenic | -0.133 | Destabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.