Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13707 | 41344;41345;41346 | chr2:178636608;178636607;178636606 | chr2:179501335;179501334;179501333 |
N2AB | 12066 | 36421;36422;36423 | chr2:178636608;178636607;178636606 | chr2:179501335;179501334;179501333 |
N2A | 11139 | 33640;33641;33642 | chr2:178636608;178636607;178636606 | chr2:179501335;179501334;179501333 |
N2B | 4642 | 14149;14150;14151 | chr2:178636608;178636607;178636606 | chr2:179501335;179501334;179501333 |
Novex-1 | 4767 | 14524;14525;14526 | chr2:178636608;178636607;178636606 | chr2:179501335;179501334;179501333 |
Novex-2 | 4834 | 14725;14726;14727 | chr2:178636608;178636607;178636606 | chr2:179501335;179501334;179501333 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.993 | D | 0.749 | 0.659 | 0.711402520684 | gnomAD-4.0.0 | 2.05305E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69881E-06 | 0 | 0 |
E/Q | rs1173154586 | -0.795 | 0.997 | N | 0.687 | 0.336 | 0.411401001288 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.7674 | likely_pathogenic | 0.839 | pathogenic | -0.73 | Destabilizing | 0.977 | D | 0.665 | neutral | D | 0.597337859 | None | None | N |
E/C | 0.9951 | likely_pathogenic | 0.9963 | pathogenic | -0.558 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
E/D | 0.5631 | ambiguous | 0.628 | pathogenic | -1.397 | Destabilizing | 0.117 | N | 0.273 | neutral | N | 0.512697036 | None | None | N |
E/F | 0.9953 | likely_pathogenic | 0.9962 | pathogenic | -0.028 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
E/G | 0.8488 | likely_pathogenic | 0.9055 | pathogenic | -1.158 | Destabilizing | 0.993 | D | 0.749 | deleterious | D | 0.613766662 | None | None | N |
E/H | 0.95 | likely_pathogenic | 0.9623 | pathogenic | -0.469 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/I | 0.9635 | likely_pathogenic | 0.9692 | pathogenic | 0.456 | Stabilizing | 0.998 | D | 0.808 | deleterious | None | None | None | None | N |
E/K | 0.8798 | likely_pathogenic | 0.9116 | pathogenic | -1.024 | Destabilizing | 0.977 | D | 0.578 | neutral | N | 0.504986905 | None | None | N |
E/L | 0.9755 | likely_pathogenic | 0.9816 | pathogenic | 0.456 | Stabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | N |
E/M | 0.9786 | likely_pathogenic | 0.9837 | pathogenic | 0.946 | Stabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
E/N | 0.8588 | likely_pathogenic | 0.8942 | pathogenic | -1.517 | Destabilizing | 0.99 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/P | 0.9955 | likely_pathogenic | 0.9966 | pathogenic | 0.083 | Stabilizing | 0.998 | D | 0.79 | deleterious | None | None | None | None | N |
E/Q | 0.5793 | likely_pathogenic | 0.6474 | pathogenic | -1.286 | Destabilizing | 0.997 | D | 0.687 | prob.neutral | N | 0.512463255 | None | None | N |
E/R | 0.9194 | likely_pathogenic | 0.9407 | pathogenic | -0.761 | Destabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/S | 0.6732 | likely_pathogenic | 0.76 | pathogenic | -1.892 | Destabilizing | 0.983 | D | 0.601 | neutral | None | None | None | None | N |
E/T | 0.7878 | likely_pathogenic | 0.8354 | pathogenic | -1.533 | Destabilizing | 0.998 | D | 0.769 | deleterious | None | None | None | None | N |
E/V | 0.892 | likely_pathogenic | 0.9116 | pathogenic | 0.083 | Stabilizing | 0.997 | D | 0.781 | deleterious | D | 0.565334174 | None | None | N |
E/W | 0.9979 | likely_pathogenic | 0.9985 | pathogenic | 0.125 | Stabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/Y | 0.9879 | likely_pathogenic | 0.9905 | pathogenic | 0.181 | Stabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.