Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13710 | 41353;41354;41355 | chr2:178636599;178636598;178636597 | chr2:179501326;179501325;179501324 |
N2AB | 12069 | 36430;36431;36432 | chr2:178636599;178636598;178636597 | chr2:179501326;179501325;179501324 |
N2A | 11142 | 33649;33650;33651 | chr2:178636599;178636598;178636597 | chr2:179501326;179501325;179501324 |
N2B | 4645 | 14158;14159;14160 | chr2:178636599;178636598;178636597 | chr2:179501326;179501325;179501324 |
Novex-1 | 4770 | 14533;14534;14535 | chr2:178636599;178636598;178636597 | chr2:179501326;179501325;179501324 |
Novex-2 | 4837 | 14734;14735;14736 | chr2:178636599;178636598;178636597 | chr2:179501326;179501325;179501324 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1429685157 | -0.915 | 0.046 | D | 0.205 | 0.161 | 0.507628581994 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/I | rs1429685157 | -0.915 | 0.046 | D | 0.205 | 0.161 | 0.507628581994 | gnomAD-4.0.0 | 3.18402E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86574E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9142 | likely_pathogenic | 0.9475 | pathogenic | -2.243 | Highly Destabilizing | 0.939 | D | 0.564 | neutral | D | 0.530033848 | None | None | N |
V/C | 0.9795 | likely_pathogenic | 0.9854 | pathogenic | -1.997 | Destabilizing | 0.999 | D | 0.798 | deleterious | None | None | None | None | N |
V/D | 0.9974 | likely_pathogenic | 0.9986 | pathogenic | -3.025 | Highly Destabilizing | 0.997 | D | 0.848 | deleterious | D | 0.741082847 | None | None | N |
V/E | 0.9915 | likely_pathogenic | 0.9958 | pathogenic | -2.821 | Highly Destabilizing | 0.998 | D | 0.829 | deleterious | None | None | None | None | N |
V/F | 0.9179 | likely_pathogenic | 0.9723 | pathogenic | -1.319 | Destabilizing | 0.982 | D | 0.817 | deleterious | D | 0.666660349 | None | None | N |
V/G | 0.9565 | likely_pathogenic | 0.9738 | pathogenic | -2.735 | Highly Destabilizing | 0.997 | D | 0.831 | deleterious | D | 0.681881423 | None | None | N |
V/H | 0.9974 | likely_pathogenic | 0.9988 | pathogenic | -2.388 | Highly Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
V/I | 0.1498 | likely_benign | 0.1642 | benign | -0.865 | Destabilizing | 0.046 | N | 0.205 | neutral | D | 0.528796589 | None | None | N |
V/K | 0.9964 | likely_pathogenic | 0.9981 | pathogenic | -1.764 | Destabilizing | 0.993 | D | 0.829 | deleterious | None | None | None | None | N |
V/L | 0.8251 | likely_pathogenic | 0.8879 | pathogenic | -0.865 | Destabilizing | 0.76 | D | 0.526 | neutral | D | 0.537081485 | None | None | N |
V/M | 0.9059 | likely_pathogenic | 0.9503 | pathogenic | -1.114 | Destabilizing | 0.986 | D | 0.754 | deleterious | None | None | None | None | N |
V/N | 0.9912 | likely_pathogenic | 0.9952 | pathogenic | -2.12 | Highly Destabilizing | 0.998 | D | 0.867 | deleterious | None | None | None | None | N |
V/P | 0.9893 | likely_pathogenic | 0.9935 | pathogenic | -1.3 | Destabilizing | 0.998 | D | 0.843 | deleterious | None | None | None | None | N |
V/Q | 0.9911 | likely_pathogenic | 0.9961 | pathogenic | -1.994 | Destabilizing | 0.998 | D | 0.851 | deleterious | None | None | None | None | N |
V/R | 0.9917 | likely_pathogenic | 0.9954 | pathogenic | -1.57 | Destabilizing | 0.998 | D | 0.864 | deleterious | None | None | None | None | N |
V/S | 0.9642 | likely_pathogenic | 0.976 | pathogenic | -2.688 | Highly Destabilizing | 0.993 | D | 0.813 | deleterious | None | None | None | None | N |
V/T | 0.9198 | likely_pathogenic | 0.9328 | pathogenic | -2.354 | Highly Destabilizing | 0.953 | D | 0.66 | neutral | None | None | None | None | N |
V/W | 0.9987 | likely_pathogenic | 0.9995 | pathogenic | -1.791 | Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | N |
V/Y | 0.9918 | likely_pathogenic | 0.997 | pathogenic | -1.482 | Destabilizing | 0.998 | D | 0.819 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.