Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13712 | 41359;41360;41361 | chr2:178636593;178636592;178636591 | chr2:179501320;179501319;179501318 |
N2AB | 12071 | 36436;36437;36438 | chr2:178636593;178636592;178636591 | chr2:179501320;179501319;179501318 |
N2A | 11144 | 33655;33656;33657 | chr2:178636593;178636592;178636591 | chr2:179501320;179501319;179501318 |
N2B | 4647 | 14164;14165;14166 | chr2:178636593;178636592;178636591 | chr2:179501320;179501319;179501318 |
Novex-1 | 4772 | 14539;14540;14541 | chr2:178636593;178636592;178636591 | chr2:179501320;179501319;179501318 |
Novex-2 | 4839 | 14740;14741;14742 | chr2:178636593;178636592;178636591 | chr2:179501320;179501319;179501318 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1425096489 | -0.237 | 0.993 | D | 0.741 | 0.393 | 0.75374075986 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
P/L | rs1425096489 | -0.237 | 0.993 | D | 0.741 | 0.393 | 0.75374075986 | gnomAD-4.0.0 | 1.36869E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79921E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.9778 | likely_pathogenic | 0.9856 | pathogenic | -0.661 | Destabilizing | 0.977 | D | 0.655 | neutral | N | 0.501504195 | None | None | N |
P/C | 0.9993 | likely_pathogenic | 0.9995 | pathogenic | -0.675 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
P/D | 0.9985 | likely_pathogenic | 0.999 | pathogenic | -0.039 | Destabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | N |
P/E | 0.9975 | likely_pathogenic | 0.9979 | pathogenic | -0.118 | Destabilizing | 0.995 | D | 0.753 | deleterious | None | None | None | None | N |
P/F | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -0.658 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
P/G | 0.9906 | likely_pathogenic | 0.9932 | pathogenic | -0.849 | Destabilizing | 0.998 | D | 0.727 | prob.delet. | None | None | None | None | N |
P/H | 0.9967 | likely_pathogenic | 0.9969 | pathogenic | -0.266 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | N | 0.506009482 | None | None | N |
P/I | 0.9988 | likely_pathogenic | 0.9991 | pathogenic | -0.298 | Destabilizing | 0.998 | D | 0.731 | prob.delet. | None | None | None | None | N |
P/K | 0.9979 | likely_pathogenic | 0.9982 | pathogenic | -0.475 | Destabilizing | 0.966 | D | 0.707 | prob.neutral | None | None | None | None | N |
P/L | 0.993 | likely_pathogenic | 0.9945 | pathogenic | -0.298 | Destabilizing | 0.993 | D | 0.741 | deleterious | D | 0.527261277 | None | None | N |
P/M | 0.999 | likely_pathogenic | 0.9992 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
P/N | 0.9975 | likely_pathogenic | 0.9981 | pathogenic | -0.224 | Destabilizing | 0.995 | D | 0.698 | prob.neutral | None | None | None | None | N |
P/Q | 0.9958 | likely_pathogenic | 0.9969 | pathogenic | -0.417 | Destabilizing | 0.995 | D | 0.731 | prob.delet. | None | None | None | None | N |
P/R | 0.994 | likely_pathogenic | 0.9943 | pathogenic | 0.021 | Stabilizing | 0.235 | N | 0.423 | neutral | N | 0.497615493 | None | None | N |
P/S | 0.99 | likely_pathogenic | 0.9939 | pathogenic | -0.715 | Destabilizing | 0.993 | D | 0.746 | deleterious | N | 0.500608132 | None | None | N |
P/T | 0.9881 | likely_pathogenic | 0.9936 | pathogenic | -0.679 | Destabilizing | 0.997 | D | 0.757 | deleterious | N | 0.505600606 | None | None | N |
P/V | 0.9948 | likely_pathogenic | 0.9962 | pathogenic | -0.382 | Destabilizing | 0.998 | D | 0.727 | prob.delet. | None | None | None | None | N |
P/W | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -0.726 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
P/Y | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -0.438 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.