Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13713 | 41362;41363;41364 | chr2:178636590;178636589;178636588 | chr2:179501317;179501316;179501315 |
N2AB | 12072 | 36439;36440;36441 | chr2:178636590;178636589;178636588 | chr2:179501317;179501316;179501315 |
N2A | 11145 | 33658;33659;33660 | chr2:178636590;178636589;178636588 | chr2:179501317;179501316;179501315 |
N2B | 4648 | 14167;14168;14169 | chr2:178636590;178636589;178636588 | chr2:179501317;179501316;179501315 |
Novex-1 | 4773 | 14542;14543;14544 | chr2:178636590;178636589;178636588 | chr2:179501317;179501316;179501315 |
Novex-2 | 4840 | 14743;14744;14745 | chr2:178636590;178636589;178636588 | chr2:179501317;179501316;179501315 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 1.0 | D | 0.711 | 0.544 | 0.683316155328 | gnomAD-4.0.0 | 1.36869E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79922E-06 | 0 | 0 |
S/P | None | None | 1.0 | N | 0.715 | 0.547 | 0.394685799254 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.3243 | likely_benign | 0.3523 | ambiguous | -0.522 | Destabilizing | 0.997 | D | 0.525 | neutral | N | 0.506009482 | None | None | N |
S/C | 0.904 | likely_pathogenic | 0.9164 | pathogenic | -0.349 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | D | 0.620174643 | None | None | N |
S/D | 0.9738 | likely_pathogenic | 0.9772 | pathogenic | 0.084 | Stabilizing | 0.999 | D | 0.678 | prob.neutral | None | None | None | None | N |
S/E | 0.9758 | likely_pathogenic | 0.9779 | pathogenic | -0.01 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | N |
S/F | 0.9598 | likely_pathogenic | 0.9731 | pathogenic | -1.082 | Destabilizing | 1.0 | D | 0.781 | deleterious | N | 0.502656465 | None | None | N |
S/G | 0.5424 | ambiguous | 0.6109 | pathogenic | -0.635 | Destabilizing | 0.999 | D | 0.579 | neutral | None | None | None | None | N |
S/H | 0.9637 | likely_pathogenic | 0.9709 | pathogenic | -1.16 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
S/I | 0.9175 | likely_pathogenic | 0.9399 | pathogenic | -0.35 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
S/K | 0.9954 | likely_pathogenic | 0.9959 | pathogenic | -0.55 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
S/L | 0.7864 | likely_pathogenic | 0.8366 | pathogenic | -0.35 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
S/M | 0.8849 | likely_pathogenic | 0.9179 | pathogenic | 0.002 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
S/N | 0.8571 | likely_pathogenic | 0.8814 | pathogenic | -0.271 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
S/P | 0.765 | likely_pathogenic | 0.7819 | pathogenic | -0.379 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | N | 0.473771128 | None | None | N |
S/Q | 0.9628 | likely_pathogenic | 0.9685 | pathogenic | -0.564 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
S/R | 0.993 | likely_pathogenic | 0.9938 | pathogenic | -0.331 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
S/T | 0.5159 | ambiguous | 0.5627 | ambiguous | -0.407 | Destabilizing | 0.999 | D | 0.582 | neutral | N | 0.498963236 | None | None | N |
S/V | 0.8731 | likely_pathogenic | 0.9045 | pathogenic | -0.379 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
S/W | 0.9716 | likely_pathogenic | 0.98 | pathogenic | -1.039 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
S/Y | 0.9431 | likely_pathogenic | 0.9596 | pathogenic | -0.783 | Destabilizing | 1.0 | D | 0.779 | deleterious | N | 0.511141902 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.