Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1372 | 4339;4340;4341 | chr2:178778968;178778967;178778966 | chr2:179643695;179643694;179643693 |
N2AB | 1372 | 4339;4340;4341 | chr2:178778968;178778967;178778966 | chr2:179643695;179643694;179643693 |
N2A | 1372 | 4339;4340;4341 | chr2:178778968;178778967;178778966 | chr2:179643695;179643694;179643693 |
N2B | 1326 | 4201;4202;4203 | chr2:178778968;178778967;178778966 | chr2:179643695;179643694;179643693 |
Novex-1 | 1326 | 4201;4202;4203 | chr2:178778968;178778967;178778966 | chr2:179643695;179643694;179643693 |
Novex-2 | 1326 | 4201;4202;4203 | chr2:178778968;178778967;178778966 | chr2:179643695;179643694;179643693 |
Novex-3 | 1372 | 4339;4340;4341 | chr2:178778968;178778967;178778966 | chr2:179643695;179643694;179643693 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | rs745676502 | -0.863 | 1.0 | N | 0.713 | 0.433 | 0.352048277211 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | I | None | 6.15E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/H | rs745676502 | -0.863 | 1.0 | N | 0.713 | 0.433 | 0.352048277211 | gnomAD-4.0.0 | 3.18168E-06 | None | None | None | None | I | None | 5.65675E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02224E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.8163 | likely_pathogenic | 0.8212 | pathogenic | -0.75 | Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | I |
N/C | 0.805 | likely_pathogenic | 0.795 | pathogenic | 0.154 | Stabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | I |
N/D | 0.7166 | likely_pathogenic | 0.6978 | pathogenic | 0.106 | Stabilizing | 0.999 | D | 0.699 | prob.neutral | N | 0.47686953 | None | None | I |
N/E | 0.9101 | likely_pathogenic | 0.9173 | pathogenic | 0.088 | Stabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | I |
N/F | 0.9268 | likely_pathogenic | 0.9306 | pathogenic | -1.102 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
N/G | 0.8748 | likely_pathogenic | 0.868 | pathogenic | -0.933 | Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | I |
N/H | 0.4138 | ambiguous | 0.4276 | ambiguous | -0.922 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | N | 0.48790916 | None | None | I |
N/I | 0.7822 | likely_pathogenic | 0.7966 | pathogenic | -0.345 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | N | 0.47101159 | None | None | I |
N/K | 0.8979 | likely_pathogenic | 0.9075 | pathogenic | 0.058 | Stabilizing | 1.0 | D | 0.735 | prob.delet. | N | 0.404570413 | None | None | I |
N/L | 0.7944 | likely_pathogenic | 0.7984 | pathogenic | -0.345 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
N/M | 0.8285 | likely_pathogenic | 0.834 | pathogenic | 0.192 | Stabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | I |
N/P | 0.9769 | likely_pathogenic | 0.9671 | pathogenic | -0.455 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
N/Q | 0.8329 | likely_pathogenic | 0.8516 | pathogenic | -0.505 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
N/R | 0.8672 | likely_pathogenic | 0.8769 | pathogenic | 0.143 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
N/S | 0.304 | likely_benign | 0.2878 | benign | -0.338 | Destabilizing | 0.999 | D | 0.653 | neutral | N | 0.373988956 | None | None | I |
N/T | 0.5746 | likely_pathogenic | 0.5666 | pathogenic | -0.192 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | N | 0.42855128 | None | None | I |
N/V | 0.7587 | likely_pathogenic | 0.7709 | pathogenic | -0.455 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | I |
N/W | 0.981 | likely_pathogenic | 0.9804 | pathogenic | -0.977 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | I |
N/Y | 0.5718 | likely_pathogenic | 0.584 | pathogenic | -0.75 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.485336317 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.