Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13724 | 41395;41396;41397 | chr2:178636557;178636556;178636555 | chr2:179501284;179501283;179501282 |
N2AB | 12083 | 36472;36473;36474 | chr2:178636557;178636556;178636555 | chr2:179501284;179501283;179501282 |
N2A | 11156 | 33691;33692;33693 | chr2:178636557;178636556;178636555 | chr2:179501284;179501283;179501282 |
N2B | 4659 | 14200;14201;14202 | chr2:178636557;178636556;178636555 | chr2:179501284;179501283;179501282 |
Novex-1 | 4784 | 14575;14576;14577 | chr2:178636557;178636556;178636555 | chr2:179501284;179501283;179501282 |
Novex-2 | 4851 | 14776;14777;14778 | chr2:178636557;178636556;178636555 | chr2:179501284;179501283;179501282 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.001 | N | 0.096 | 0.112 | 0.233785782151 | gnomAD-4.0.0 | 6.84321E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99585E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1187 | likely_benign | 0.1339 | benign | -0.274 | Destabilizing | 0.116 | N | 0.336 | neutral | None | None | None | None | N |
S/C | 0.2291 | likely_benign | 0.2934 | benign | -0.218 | Destabilizing | 0.975 | D | 0.395 | neutral | D | 0.545572946 | None | None | N |
S/D | 0.5633 | ambiguous | 0.727 | pathogenic | 0.005 | Stabilizing | 0.241 | N | 0.335 | neutral | None | None | None | None | N |
S/E | 0.6326 | likely_pathogenic | 0.7552 | pathogenic | -0.103 | Destabilizing | 0.388 | N | 0.332 | neutral | None | None | None | None | N |
S/F | 0.3847 | ambiguous | 0.5248 | ambiguous | -0.943 | Destabilizing | 0.932 | D | 0.435 | neutral | None | None | None | None | N |
S/G | 0.1172 | likely_benign | 0.1483 | benign | -0.356 | Destabilizing | 0.001 | N | 0.096 | neutral | N | 0.477363063 | None | None | N |
S/H | 0.4308 | ambiguous | 0.56 | ambiguous | -0.821 | Destabilizing | 0.69 | D | 0.373 | neutral | None | None | None | None | N |
S/I | 0.1994 | likely_benign | 0.2816 | benign | -0.193 | Destabilizing | 0.627 | D | 0.445 | neutral | N | 0.494093795 | None | None | N |
S/K | 0.7644 | likely_pathogenic | 0.8715 | pathogenic | -0.447 | Destabilizing | 0.241 | N | 0.341 | neutral | None | None | None | None | N |
S/L | 0.1894 | likely_benign | 0.2458 | benign | -0.193 | Destabilizing | 0.388 | N | 0.427 | neutral | None | None | None | None | N |
S/M | 0.2467 | likely_benign | 0.3118 | benign | 0.038 | Stabilizing | 0.981 | D | 0.371 | neutral | None | None | None | None | N |
S/N | 0.113 | likely_benign | 0.166 | benign | -0.137 | Destabilizing | 0.001 | N | 0.196 | neutral | N | 0.466112123 | None | None | N |
S/P | 0.9671 | likely_pathogenic | 0.987 | pathogenic | -0.193 | Destabilizing | 0.818 | D | 0.38 | neutral | None | None | None | None | N |
S/Q | 0.5031 | ambiguous | 0.5888 | pathogenic | -0.41 | Destabilizing | 0.69 | D | 0.377 | neutral | None | None | None | None | N |
S/R | 0.6912 | likely_pathogenic | 0.8202 | pathogenic | -0.19 | Destabilizing | 0.003 | N | 0.217 | neutral | N | 0.479314956 | None | None | N |
S/T | 0.1057 | likely_benign | 0.1281 | benign | -0.243 | Destabilizing | 0.006 | N | 0.205 | neutral | N | 0.445061651 | None | None | N |
S/V | 0.2102 | likely_benign | 0.287 | benign | -0.193 | Destabilizing | 0.388 | N | 0.429 | neutral | None | None | None | None | N |
S/W | 0.6741 | likely_pathogenic | 0.8095 | pathogenic | -0.983 | Destabilizing | 0.981 | D | 0.536 | neutral | None | None | None | None | N |
S/Y | 0.357 | ambiguous | 0.5092 | ambiguous | -0.692 | Destabilizing | 0.932 | D | 0.433 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.