Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13726 | 41401;41402;41403 | chr2:178636551;178636550;178636549 | chr2:179501278;179501277;179501276 |
N2AB | 12085 | 36478;36479;36480 | chr2:178636551;178636550;178636549 | chr2:179501278;179501277;179501276 |
N2A | 11158 | 33697;33698;33699 | chr2:178636551;178636550;178636549 | chr2:179501278;179501277;179501276 |
N2B | 4661 | 14206;14207;14208 | chr2:178636551;178636550;178636549 | chr2:179501278;179501277;179501276 |
Novex-1 | 4786 | 14581;14582;14583 | chr2:178636551;178636550;178636549 | chr2:179501278;179501277;179501276 |
Novex-2 | 4853 | 14782;14783;14784 | chr2:178636551;178636550;178636549 | chr2:179501278;179501277;179501276 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | rs2060465786 | None | 0.939 | D | 0.57 | 0.671 | 0.80964421427 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 9.42E-05 | 0 | 0 | 0 | 0 |
I/S | rs2060465786 | None | 0.939 | D | 0.57 | 0.671 | 0.80964421427 | gnomAD-4.0.0 | 6.57583E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.41974E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9772 | likely_pathogenic | 0.9908 | pathogenic | -2.288 | Highly Destabilizing | 0.543 | D | 0.52 | neutral | None | None | None | None | N |
I/C | 0.9881 | likely_pathogenic | 0.9958 | pathogenic | -1.432 | Destabilizing | 0.996 | D | 0.577 | neutral | None | None | None | None | N |
I/D | 0.999 | likely_pathogenic | 0.9996 | pathogenic | -2.179 | Highly Destabilizing | 0.984 | D | 0.663 | neutral | None | None | None | None | N |
I/E | 0.9953 | likely_pathogenic | 0.9979 | pathogenic | -1.986 | Destabilizing | 0.953 | D | 0.644 | neutral | None | None | None | None | N |
I/F | 0.7911 | likely_pathogenic | 0.9025 | pathogenic | -1.423 | Destabilizing | 0.884 | D | 0.539 | neutral | D | 0.605657846 | None | None | N |
I/G | 0.9966 | likely_pathogenic | 0.9987 | pathogenic | -2.796 | Highly Destabilizing | 0.953 | D | 0.632 | neutral | None | None | None | None | N |
I/H | 0.9935 | likely_pathogenic | 0.9976 | pathogenic | -2.102 | Highly Destabilizing | 0.996 | D | 0.641 | neutral | None | None | None | None | N |
I/K | 0.9895 | likely_pathogenic | 0.9946 | pathogenic | -1.626 | Destabilizing | 0.953 | D | 0.629 | neutral | None | None | None | None | N |
I/L | 0.1801 | likely_benign | 0.2559 | benign | -0.846 | Destabilizing | 0.001 | N | 0.146 | neutral | N | 0.421361526 | None | None | N |
I/M | 0.4018 | ambiguous | 0.5645 | pathogenic | -0.693 | Destabilizing | 0.884 | D | 0.592 | neutral | N | 0.518712898 | None | None | N |
I/N | 0.9841 | likely_pathogenic | 0.9929 | pathogenic | -1.833 | Destabilizing | 0.979 | D | 0.677 | prob.neutral | D | 0.620120269 | None | None | N |
I/P | 0.9949 | likely_pathogenic | 0.997 | pathogenic | -1.305 | Destabilizing | 0.984 | D | 0.675 | neutral | None | None | None | None | N |
I/Q | 0.9899 | likely_pathogenic | 0.9958 | pathogenic | -1.745 | Destabilizing | 0.984 | D | 0.671 | neutral | None | None | None | None | N |
I/R | 0.9852 | likely_pathogenic | 0.992 | pathogenic | -1.335 | Destabilizing | 0.953 | D | 0.665 | neutral | None | None | None | None | N |
I/S | 0.9832 | likely_pathogenic | 0.9933 | pathogenic | -2.546 | Highly Destabilizing | 0.939 | D | 0.57 | neutral | D | 0.636185953 | None | None | N |
I/T | 0.9653 | likely_pathogenic | 0.9852 | pathogenic | -2.2 | Highly Destabilizing | 0.684 | D | 0.529 | neutral | D | 0.613800153 | None | None | N |
I/V | 0.2326 | likely_benign | 0.3487 | ambiguous | -1.305 | Destabilizing | 0.164 | N | 0.339 | neutral | N | 0.502171735 | None | None | N |
I/W | 0.9938 | likely_pathogenic | 0.9975 | pathogenic | -1.7 | Destabilizing | 0.996 | D | 0.665 | neutral | None | None | None | None | N |
I/Y | 0.9776 | likely_pathogenic | 0.9911 | pathogenic | -1.403 | Destabilizing | 0.953 | D | 0.613 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.