Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13739 | 41440;41441;41442 | chr2:178636512;178636511;178636510 | chr2:179501239;179501238;179501237 |
N2AB | 12098 | 36517;36518;36519 | chr2:178636512;178636511;178636510 | chr2:179501239;179501238;179501237 |
N2A | 11171 | 33736;33737;33738 | chr2:178636512;178636511;178636510 | chr2:179501239;179501238;179501237 |
N2B | 4674 | 14245;14246;14247 | chr2:178636512;178636511;178636510 | chr2:179501239;179501238;179501237 |
Novex-1 | 4799 | 14620;14621;14622 | chr2:178636512;178636511;178636510 | chr2:179501239;179501238;179501237 |
Novex-2 | 4866 | 14821;14822;14823 | chr2:178636512;178636511;178636510 | chr2:179501239;179501238;179501237 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs2060461606 | None | 1.0 | N | 0.743 | 0.316 | 0.330331372229 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/N | rs2060461606 | None | 1.0 | N | 0.743 | 0.316 | 0.330331372229 | gnomAD-4.0.0 | 6.57488E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47089E-05 | 0 | 0 |
K/R | None | None | 0.999 | N | 0.633 | 0.258 | 0.518641613453 | gnomAD-4.0.0 | 1.59193E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85956E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.965 | likely_pathogenic | 0.9772 | pathogenic | -0.517 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
K/C | 0.9921 | likely_pathogenic | 0.9932 | pathogenic | -0.628 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
K/D | 0.9806 | likely_pathogenic | 0.9879 | pathogenic | 0.199 | Stabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
K/E | 0.9473 | likely_pathogenic | 0.96 | pathogenic | 0.249 | Stabilizing | 0.999 | D | 0.7 | prob.neutral | N | 0.501375552 | None | None | N |
K/F | 0.9958 | likely_pathogenic | 0.9962 | pathogenic | -0.616 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
K/G | 0.964 | likely_pathogenic | 0.9729 | pathogenic | -0.784 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
K/H | 0.9241 | likely_pathogenic | 0.9281 | pathogenic | -1.187 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
K/I | 0.9752 | likely_pathogenic | 0.9787 | pathogenic | 0.132 | Stabilizing | 1.0 | D | 0.78 | deleterious | N | 0.503788754 | None | None | N |
K/L | 0.9593 | likely_pathogenic | 0.962 | pathogenic | 0.132 | Stabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
K/M | 0.9221 | likely_pathogenic | 0.9279 | pathogenic | 0.135 | Stabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
K/N | 0.9537 | likely_pathogenic | 0.9639 | pathogenic | -0.106 | Destabilizing | 1.0 | D | 0.743 | deleterious | N | 0.504009105 | None | None | N |
K/P | 0.9753 | likely_pathogenic | 0.9861 | pathogenic | -0.055 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
K/Q | 0.8356 | likely_pathogenic | 0.8455 | pathogenic | -0.331 | Destabilizing | 1.0 | D | 0.741 | deleterious | N | 0.508220491 | None | None | N |
K/R | 0.2752 | likely_benign | 0.2559 | benign | -0.293 | Destabilizing | 0.999 | D | 0.633 | neutral | N | 0.491818601 | None | None | N |
K/S | 0.9714 | likely_pathogenic | 0.9798 | pathogenic | -0.832 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/T | 0.9114 | likely_pathogenic | 0.9294 | pathogenic | -0.601 | Destabilizing | 1.0 | D | 0.769 | deleterious | N | 0.501713739 | None | None | N |
K/V | 0.9633 | likely_pathogenic | 0.972 | pathogenic | -0.055 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
K/W | 0.9918 | likely_pathogenic | 0.9931 | pathogenic | -0.452 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
K/Y | 0.9843 | likely_pathogenic | 0.9836 | pathogenic | -0.117 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.