Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13741 | 41446;41447;41448 | chr2:178636506;178636505;178636504 | chr2:179501233;179501232;179501231 |
N2AB | 12100 | 36523;36524;36525 | chr2:178636506;178636505;178636504 | chr2:179501233;179501232;179501231 |
N2A | 11173 | 33742;33743;33744 | chr2:178636506;178636505;178636504 | chr2:179501233;179501232;179501231 |
N2B | 4676 | 14251;14252;14253 | chr2:178636506;178636505;178636504 | chr2:179501233;179501232;179501231 |
Novex-1 | 4801 | 14626;14627;14628 | chr2:178636506;178636505;178636504 | chr2:179501233;179501232;179501231 |
Novex-2 | 4868 | 14827;14828;14829 | chr2:178636506;178636505;178636504 | chr2:179501233;179501232;179501231 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.805 | N | 0.753 | 0.218 | 0.317667799068 | gnomAD-4.0.0 | 1.59195E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85958E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9923 | likely_pathogenic | 0.9931 | pathogenic | -1.366 | Destabilizing | 0.693 | D | 0.731 | prob.delet. | None | None | None | None | N |
R/C | 0.8778 | likely_pathogenic | 0.8826 | pathogenic | -1.702 | Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
R/D | 0.9985 | likely_pathogenic | 0.9986 | pathogenic | -1.084 | Destabilizing | 0.975 | D | 0.769 | deleterious | None | None | None | None | N |
R/E | 0.9834 | likely_pathogenic | 0.9841 | pathogenic | -0.926 | Destabilizing | 0.916 | D | 0.696 | prob.neutral | None | None | None | None | N |
R/F | 0.9937 | likely_pathogenic | 0.9952 | pathogenic | -1.079 | Destabilizing | 0.987 | D | 0.844 | deleterious | None | None | None | None | N |
R/G | 0.9852 | likely_pathogenic | 0.9875 | pathogenic | -1.673 | Destabilizing | 0.805 | D | 0.753 | deleterious | N | 0.437751681 | None | None | N |
R/H | 0.7963 | likely_pathogenic | 0.828 | pathogenic | -1.592 | Destabilizing | 0.996 | D | 0.785 | deleterious | None | None | None | None | N |
R/I | 0.9828 | likely_pathogenic | 0.9812 | pathogenic | -0.514 | Destabilizing | 0.983 | D | 0.849 | deleterious | N | 0.49479484 | None | None | N |
R/K | 0.818 | likely_pathogenic | 0.8345 | pathogenic | -1.411 | Destabilizing | 0.773 | D | 0.664 | neutral | N | 0.437417152 | None | None | N |
R/L | 0.9685 | likely_pathogenic | 0.9701 | pathogenic | -0.514 | Destabilizing | 0.916 | D | 0.768 | deleterious | None | None | None | None | N |
R/M | 0.9885 | likely_pathogenic | 0.9889 | pathogenic | -0.903 | Destabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
R/N | 0.9949 | likely_pathogenic | 0.9955 | pathogenic | -1.268 | Destabilizing | 0.916 | D | 0.719 | prob.delet. | None | None | None | None | N |
R/P | 0.9992 | likely_pathogenic | 0.9991 | pathogenic | -0.782 | Destabilizing | 0.987 | D | 0.809 | deleterious | None | None | None | None | N |
R/Q | 0.7798 | likely_pathogenic | 0.8111 | pathogenic | -1.264 | Destabilizing | 0.975 | D | 0.731 | prob.delet. | None | None | None | None | N |
R/S | 0.9947 | likely_pathogenic | 0.9953 | pathogenic | -1.965 | Destabilizing | 0.099 | N | 0.548 | neutral | N | 0.44219268 | None | None | N |
R/T | 0.9899 | likely_pathogenic | 0.9898 | pathogenic | -1.619 | Destabilizing | 0.805 | D | 0.765 | deleterious | N | 0.427418971 | None | None | N |
R/V | 0.9826 | likely_pathogenic | 0.9819 | pathogenic | -0.782 | Destabilizing | 0.975 | D | 0.821 | deleterious | None | None | None | None | N |
R/W | 0.9157 | likely_pathogenic | 0.9202 | pathogenic | -0.774 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
R/Y | 0.9718 | likely_pathogenic | 0.9795 | pathogenic | -0.442 | Destabilizing | 0.996 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.