Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13750 | 41473;41474;41475 | chr2:178636479;178636478;178636477 | chr2:179501206;179501205;179501204 |
N2AB | 12109 | 36550;36551;36552 | chr2:178636479;178636478;178636477 | chr2:179501206;179501205;179501204 |
N2A | 11182 | 33769;33770;33771 | chr2:178636479;178636478;178636477 | chr2:179501206;179501205;179501204 |
N2B | 4685 | 14278;14279;14280 | chr2:178636479;178636478;178636477 | chr2:179501206;179501205;179501204 |
Novex-1 | 4810 | 14653;14654;14655 | chr2:178636479;178636478;178636477 | chr2:179501206;179501205;179501204 |
Novex-2 | 4877 | 14854;14855;14856 | chr2:178636479;178636478;178636477 | chr2:179501206;179501205;179501204 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | N | 0.61 | 0.338 | 0.493494165309 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3823 | ambiguous | 0.4031 | ambiguous | -0.881 | Destabilizing | 0.999 | D | 0.561 | neutral | None | None | None | None | I |
L/C | 0.7959 | likely_pathogenic | 0.8535 | pathogenic | -0.864 | Destabilizing | 1.0 | D | 0.599 | neutral | None | None | None | None | I |
L/D | 0.8547 | likely_pathogenic | 0.8584 | pathogenic | -0.066 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | I |
L/E | 0.5524 | ambiguous | 0.5553 | ambiguous | -0.091 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
L/F | 0.3107 | likely_benign | 0.344 | ambiguous | -0.612 | Destabilizing | 1.0 | D | 0.61 | neutral | N | 0.448401997 | None | None | I |
L/G | 0.7344 | likely_pathogenic | 0.7493 | pathogenic | -1.113 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
L/H | 0.4667 | ambiguous | 0.5167 | ambiguous | -0.247 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | N | 0.472401436 | None | None | I |
L/I | 0.1153 | likely_benign | 0.1326 | benign | -0.352 | Destabilizing | 0.999 | D | 0.385 | neutral | N | 0.434363586 | None | None | I |
L/K | 0.368 | ambiguous | 0.393 | ambiguous | -0.501 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | I |
L/M | 0.1785 | likely_benign | 0.1898 | benign | -0.588 | Destabilizing | 1.0 | D | 0.597 | neutral | None | None | None | None | I |
L/N | 0.5726 | likely_pathogenic | 0.5738 | pathogenic | -0.402 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
L/P | 0.3217 | likely_benign | 0.3042 | benign | -0.496 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | N | 0.450419342 | None | None | I |
L/Q | 0.2845 | likely_benign | 0.3045 | benign | -0.508 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
L/R | 0.3269 | likely_benign | 0.3755 | ambiguous | -0.04 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | N | 0.450407411 | None | None | I |
L/S | 0.4953 | ambiguous | 0.5415 | ambiguous | -0.964 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | I |
L/T | 0.3646 | ambiguous | 0.3884 | ambiguous | -0.862 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
L/V | 0.1211 | likely_benign | 0.1431 | benign | -0.496 | Destabilizing | 0.999 | D | 0.423 | neutral | N | 0.452008409 | None | None | I |
L/W | 0.5625 | ambiguous | 0.6241 | pathogenic | -0.632 | Destabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | I |
L/Y | 0.5959 | likely_pathogenic | 0.6332 | pathogenic | -0.399 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.