Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13751 | 41476;41477;41478 | chr2:178636476;178636475;178636474 | chr2:179501203;179501202;179501201 |
N2AB | 12110 | 36553;36554;36555 | chr2:178636476;178636475;178636474 | chr2:179501203;179501202;179501201 |
N2A | 11183 | 33772;33773;33774 | chr2:178636476;178636475;178636474 | chr2:179501203;179501202;179501201 |
N2B | 4686 | 14281;14282;14283 | chr2:178636476;178636475;178636474 | chr2:179501203;179501202;179501201 |
Novex-1 | 4811 | 14656;14657;14658 | chr2:178636476;178636475;178636474 | chr2:179501203;179501202;179501201 |
Novex-2 | 4878 | 14857;14858;14859 | chr2:178636476;178636475;178636474 | chr2:179501203;179501202;179501201 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs1327407922 | None | 1.0 | D | 0.709 | 0.448 | None | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1077 | likely_benign | 0.1227 | benign | -0.184 | Destabilizing | 0.997 | D | 0.416 | neutral | N | 0.455196957 | None | None | I |
S/C | 0.4067 | ambiguous | 0.4318 | ambiguous | -0.292 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | D | 0.646671908 | None | None | I |
S/D | 0.5687 | likely_pathogenic | 0.6778 | pathogenic | 0.078 | Stabilizing | 0.999 | D | 0.563 | neutral | None | None | None | None | I |
S/E | 0.6615 | likely_pathogenic | 0.7636 | pathogenic | -0.029 | Destabilizing | 0.999 | D | 0.556 | neutral | None | None | None | None | I |
S/F | 0.4601 | ambiguous | 0.5836 | pathogenic | -0.903 | Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.51269937 | None | None | I |
S/G | 0.1449 | likely_benign | 0.1446 | benign | -0.244 | Destabilizing | 0.999 | D | 0.461 | neutral | None | None | None | None | I |
S/H | 0.6323 | likely_pathogenic | 0.6991 | pathogenic | -0.624 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
S/I | 0.3721 | ambiguous | 0.4728 | ambiguous | -0.159 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
S/K | 0.8864 | likely_pathogenic | 0.9327 | pathogenic | -0.348 | Destabilizing | 0.999 | D | 0.552 | neutral | None | None | None | None | I |
S/L | 0.1715 | likely_benign | 0.2145 | benign | -0.159 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | I |
S/M | 0.3587 | ambiguous | 0.415 | ambiguous | -0.052 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
S/N | 0.2337 | likely_benign | 0.2873 | benign | -0.1 | Destabilizing | 0.999 | D | 0.531 | neutral | None | None | None | None | I |
S/P | 0.3385 | likely_benign | 0.4432 | ambiguous | -0.142 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | D | 0.543220011 | None | None | I |
S/Q | 0.7091 | likely_pathogenic | 0.7676 | pathogenic | -0.341 | Destabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | I |
S/R | 0.842 | likely_pathogenic | 0.9009 | pathogenic | -0.101 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
S/T | 0.1269 | likely_benign | 0.1442 | benign | -0.21 | Destabilizing | 0.999 | D | 0.455 | neutral | N | 0.44547735 | None | None | I |
S/V | 0.3702 | ambiguous | 0.4625 | ambiguous | -0.142 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
S/W | 0.6359 | likely_pathogenic | 0.7192 | pathogenic | -0.968 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
S/Y | 0.4754 | ambiguous | 0.5711 | pathogenic | -0.653 | Destabilizing | 1.0 | D | 0.747 | deleterious | D | 0.567436042 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.