Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13755 | 41488;41489;41490 | chr2:178636464;178636463;178636462 | chr2:179501191;179501190;179501189 |
N2AB | 12114 | 36565;36566;36567 | chr2:178636464;178636463;178636462 | chr2:179501191;179501190;179501189 |
N2A | 11187 | 33784;33785;33786 | chr2:178636464;178636463;178636462 | chr2:179501191;179501190;179501189 |
N2B | 4690 | 14293;14294;14295 | chr2:178636464;178636463;178636462 | chr2:179501191;179501190;179501189 |
Novex-1 | 4815 | 14668;14669;14670 | chr2:178636464;178636463;178636462 | chr2:179501191;179501190;179501189 |
Novex-2 | 4882 | 14869;14870;14871 | chr2:178636464;178636463;178636462 | chr2:179501191;179501190;179501189 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.999 | D | 0.703 | 0.595 | 0.47409059586 | gnomAD-4.0.0 | 1.59234E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85992E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3198 | likely_benign | 0.3941 | ambiguous | -0.835 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | D | 0.55275671 | None | None | N |
E/C | 0.9636 | likely_pathogenic | 0.9766 | pathogenic | -0.163 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
E/D | 0.2101 | likely_benign | 0.2355 | benign | -0.796 | Destabilizing | 0.999 | D | 0.52 | neutral | N | 0.511380953 | None | None | N |
E/F | 0.9012 | likely_pathogenic | 0.9378 | pathogenic | -0.698 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
E/G | 0.5378 | ambiguous | 0.6484 | pathogenic | -1.1 | Destabilizing | 1.0 | D | 0.756 | deleterious | D | 0.689128877 | None | None | N |
E/H | 0.7862 | likely_pathogenic | 0.8608 | pathogenic | -0.834 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/I | 0.4445 | ambiguous | 0.5446 | ambiguous | -0.141 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
E/K | 0.3725 | ambiguous | 0.5241 | ambiguous | -0.058 | Destabilizing | 0.999 | D | 0.607 | neutral | N | 0.507483618 | None | None | N |
E/L | 0.6085 | likely_pathogenic | 0.7143 | pathogenic | -0.141 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
E/M | 0.6268 | likely_pathogenic | 0.7212 | pathogenic | 0.301 | Stabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
E/N | 0.3677 | ambiguous | 0.464 | ambiguous | -0.423 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/P | 0.8972 | likely_pathogenic | 0.9132 | pathogenic | -0.353 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
E/Q | 0.2939 | likely_benign | 0.3818 | ambiguous | -0.393 | Destabilizing | 1.0 | D | 0.623 | neutral | N | 0.511726249 | None | None | N |
E/R | 0.5997 | likely_pathogenic | 0.727 | pathogenic | 0.066 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/S | 0.3685 | ambiguous | 0.4554 | ambiguous | -0.649 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
E/T | 0.3027 | likely_benign | 0.3926 | ambiguous | -0.429 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
E/V | 0.2988 | likely_benign | 0.3801 | ambiguous | -0.353 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.496397841 | None | None | N |
E/W | 0.9761 | likely_pathogenic | 0.9858 | pathogenic | -0.487 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
E/Y | 0.8669 | likely_pathogenic | 0.9172 | pathogenic | -0.433 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.