Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13764 | 41515;41516;41517 | chr2:178636437;178636436;178636435 | chr2:179501164;179501163;179501162 |
N2AB | 12123 | 36592;36593;36594 | chr2:178636437;178636436;178636435 | chr2:179501164;179501163;179501162 |
N2A | 11196 | 33811;33812;33813 | chr2:178636437;178636436;178636435 | chr2:179501164;179501163;179501162 |
N2B | 4699 | 14320;14321;14322 | chr2:178636437;178636436;178636435 | chr2:179501164;179501163;179501162 |
Novex-1 | 4824 | 14695;14696;14697 | chr2:178636437;178636436;178636435 | chr2:179501164;179501163;179501162 |
Novex-2 | 4891 | 14896;14897;14898 | chr2:178636437;178636436;178636435 | chr2:179501164;179501163;179501162 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs1417225547 | 0.475 | 0.238 | N | 0.227 | 0.143 | 0.173771789658 | gnomAD-4.0.0 | 3.19518E-06 | None | None | None | None | I | None | 0 | 4.5958E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.5754 | likely_pathogenic | 0.6916 | pathogenic | -0.136 | Destabilizing | 0.927 | D | 0.516 | neutral | None | None | None | None | I |
N/C | 0.8542 | likely_pathogenic | 0.8801 | pathogenic | -0.147 | Destabilizing | 1.0 | D | 0.599 | neutral | None | None | None | None | I |
N/D | 0.4236 | ambiguous | 0.5863 | pathogenic | -0.185 | Destabilizing | 0.979 | D | 0.39 | neutral | N | 0.489395234 | None | None | I |
N/E | 0.8191 | likely_pathogenic | 0.9071 | pathogenic | -0.258 | Destabilizing | 0.969 | D | 0.385 | neutral | None | None | None | None | I |
N/F | 0.9267 | likely_pathogenic | 0.9445 | pathogenic | -0.81 | Destabilizing | 0.999 | D | 0.585 | neutral | None | None | None | None | I |
N/G | 0.4255 | ambiguous | 0.5191 | ambiguous | -0.172 | Destabilizing | 0.013 | N | 0.228 | neutral | None | None | None | None | I |
N/H | 0.3674 | ambiguous | 0.4953 | ambiguous | -0.175 | Destabilizing | 0.998 | D | 0.458 | neutral | N | 0.48419418 | None | None | I |
N/I | 0.7116 | likely_pathogenic | 0.7776 | pathogenic | -0.135 | Destabilizing | 0.998 | D | 0.581 | neutral | N | 0.461274251 | None | None | I |
N/K | 0.7368 | likely_pathogenic | 0.8918 | pathogenic | -0.153 | Destabilizing | 0.238 | N | 0.227 | neutral | N | 0.494493149 | None | None | I |
N/L | 0.6603 | likely_pathogenic | 0.7329 | pathogenic | -0.135 | Destabilizing | 0.984 | D | 0.554 | neutral | None | None | None | None | I |
N/M | 0.7448 | likely_pathogenic | 0.8161 | pathogenic | -0.167 | Destabilizing | 1.0 | D | 0.576 | neutral | None | None | None | None | I |
N/P | 0.8222 | likely_pathogenic | 0.8484 | pathogenic | -0.118 | Destabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | I |
N/Q | 0.6632 | likely_pathogenic | 0.793 | pathogenic | -0.411 | Destabilizing | 0.991 | D | 0.431 | neutral | None | None | None | None | I |
N/R | 0.8041 | likely_pathogenic | 0.9013 | pathogenic | -0.064 | Destabilizing | 0.939 | D | 0.423 | neutral | None | None | None | None | I |
N/S | 0.1269 | likely_benign | 0.1639 | benign | -0.225 | Destabilizing | 0.906 | D | 0.408 | neutral | N | 0.466649041 | None | None | I |
N/T | 0.3705 | ambiguous | 0.4643 | ambiguous | -0.217 | Destabilizing | 0.979 | D | 0.369 | neutral | N | 0.469328123 | None | None | I |
N/V | 0.6851 | likely_pathogenic | 0.7527 | pathogenic | -0.118 | Destabilizing | 0.995 | D | 0.564 | neutral | None | None | None | None | I |
N/W | 0.9754 | likely_pathogenic | 0.981 | pathogenic | -1.004 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | I |
N/Y | 0.6172 | likely_pathogenic | 0.6916 | pathogenic | -0.683 | Destabilizing | 0.998 | D | 0.577 | neutral | N | 0.473835125 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.