Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13765 | 41518;41519;41520 | chr2:178636434;178636433;178636432 | chr2:179501161;179501160;179501159 |
N2AB | 12124 | 36595;36596;36597 | chr2:178636434;178636433;178636432 | chr2:179501161;179501160;179501159 |
N2A | 11197 | 33814;33815;33816 | chr2:178636434;178636433;178636432 | chr2:179501161;179501160;179501159 |
N2B | 4700 | 14323;14324;14325 | chr2:178636434;178636433;178636432 | chr2:179501161;179501160;179501159 |
Novex-1 | 4825 | 14698;14699;14700 | chr2:178636434;178636433;178636432 | chr2:179501161;179501160;179501159 |
Novex-2 | 4892 | 14899;14900;14901 | chr2:178636434;178636433;178636432 | chr2:179501161;179501160;179501159 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1376605407 | 0.025 | 0.996 | N | 0.519 | 0.432 | 0.435152311215 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
K/E | rs1376605407 | 0.025 | 0.996 | N | 0.519 | 0.432 | 0.435152311215 | gnomAD-4.0.0 | 2.05607E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70149E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9335 | likely_pathogenic | 0.9589 | pathogenic | 0.07 | Stabilizing | 0.998 | D | 0.547 | neutral | None | None | None | None | I |
K/C | 0.9905 | likely_pathogenic | 0.9923 | pathogenic | -0.322 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
K/D | 0.9779 | likely_pathogenic | 0.9878 | pathogenic | -0.037 | Destabilizing | 0.998 | D | 0.539 | neutral | None | None | None | None | I |
K/E | 0.8658 | likely_pathogenic | 0.9251 | pathogenic | -0.038 | Destabilizing | 0.996 | D | 0.519 | neutral | N | 0.456187271 | None | None | I |
K/F | 0.9942 | likely_pathogenic | 0.9965 | pathogenic | -0.201 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
K/G | 0.9513 | likely_pathogenic | 0.9635 | pathogenic | -0.097 | Destabilizing | 0.997 | D | 0.586 | neutral | None | None | None | None | I |
K/H | 0.8645 | likely_pathogenic | 0.8981 | pathogenic | -0.284 | Destabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | I |
K/I | 0.9346 | likely_pathogenic | 0.9602 | pathogenic | 0.423 | Stabilizing | 1.0 | D | 0.645 | neutral | N | 0.513657448 | None | None | I |
K/L | 0.9256 | likely_pathogenic | 0.9522 | pathogenic | 0.423 | Stabilizing | 1.0 | D | 0.601 | neutral | None | None | None | None | I |
K/M | 0.8809 | likely_pathogenic | 0.9185 | pathogenic | 0.09 | Stabilizing | 1.0 | D | 0.612 | neutral | None | None | None | None | I |
K/N | 0.9552 | likely_pathogenic | 0.9731 | pathogenic | 0.127 | Stabilizing | 0.884 | D | 0.327 | neutral | N | 0.485973397 | None | None | I |
K/P | 0.9946 | likely_pathogenic | 0.9964 | pathogenic | 0.331 | Stabilizing | 1.0 | D | 0.574 | neutral | None | None | None | None | I |
K/Q | 0.6119 | likely_pathogenic | 0.7089 | pathogenic | -0.014 | Destabilizing | 0.999 | D | 0.634 | neutral | N | 0.494703994 | None | None | I |
K/R | 0.1737 | likely_benign | 0.1879 | benign | -0.057 | Destabilizing | 0.998 | D | 0.555 | neutral | N | 0.492911842 | None | None | I |
K/S | 0.9552 | likely_pathogenic | 0.9728 | pathogenic | -0.292 | Destabilizing | 0.997 | D | 0.519 | neutral | None | None | None | None | I |
K/T | 0.824 | likely_pathogenic | 0.885 | pathogenic | -0.158 | Destabilizing | 0.999 | D | 0.565 | neutral | N | 0.51019007 | None | None | I |
K/V | 0.8983 | likely_pathogenic | 0.9322 | pathogenic | 0.331 | Stabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | I |
K/W | 0.9892 | likely_pathogenic | 0.9925 | pathogenic | -0.273 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
K/Y | 0.9793 | likely_pathogenic | 0.985 | pathogenic | 0.09 | Stabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.