Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13769 | 41530;41531;41532 | chr2:178636422;178636421;178636420 | chr2:179501149;179501148;179501147 |
N2AB | 12128 | 36607;36608;36609 | chr2:178636422;178636421;178636420 | chr2:179501149;179501148;179501147 |
N2A | 11201 | 33826;33827;33828 | chr2:178636422;178636421;178636420 | chr2:179501149;179501148;179501147 |
N2B | 4704 | 14335;14336;14337 | chr2:178636422;178636421;178636420 | chr2:179501149;179501148;179501147 |
Novex-1 | 4829 | 14710;14711;14712 | chr2:178636422;178636421;178636420 | chr2:179501149;179501148;179501147 |
Novex-2 | 4896 | 14911;14912;14913 | chr2:178636422;178636421;178636420 | chr2:179501149;179501148;179501147 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs1306932117 | -1.105 | 0.999 | D | 0.775 | 0.518 | 0.733710926309 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
S/F | rs1306932117 | -1.105 | 0.999 | D | 0.775 | 0.518 | 0.733710926309 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2318 | likely_benign | 0.2432 | benign | -0.752 | Destabilizing | 0.953 | D | 0.489 | neutral | N | 0.48865234 | None | None | N |
S/C | 0.2492 | likely_benign | 0.2927 | benign | -0.488 | Destabilizing | 0.135 | N | 0.461 | neutral | N | 0.504062077 | None | None | N |
S/D | 0.9761 | likely_pathogenic | 0.979 | pathogenic | -0.245 | Destabilizing | 0.999 | D | 0.605 | neutral | None | None | None | None | N |
S/E | 0.9865 | likely_pathogenic | 0.986 | pathogenic | -0.21 | Destabilizing | 0.999 | D | 0.597 | neutral | None | None | None | None | N |
S/F | 0.9552 | likely_pathogenic | 0.9563 | pathogenic | -0.81 | Destabilizing | 0.999 | D | 0.775 | deleterious | D | 0.570883325 | None | None | N |
S/G | 0.5108 | ambiguous | 0.5038 | ambiguous | -1.044 | Destabilizing | 0.993 | D | 0.578 | neutral | None | None | None | None | N |
S/H | 0.9472 | likely_pathogenic | 0.9481 | pathogenic | -1.469 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
S/I | 0.898 | likely_pathogenic | 0.9011 | pathogenic | -0.073 | Destabilizing | 0.998 | D | 0.761 | deleterious | None | None | None | None | N |
S/K | 0.9962 | likely_pathogenic | 0.9957 | pathogenic | -0.589 | Destabilizing | 0.999 | D | 0.595 | neutral | None | None | None | None | N |
S/L | 0.759 | likely_pathogenic | 0.7509 | pathogenic | -0.073 | Destabilizing | 0.985 | D | 0.689 | prob.neutral | None | None | None | None | N |
S/M | 0.8136 | likely_pathogenic | 0.8171 | pathogenic | 0.095 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
S/N | 0.8214 | likely_pathogenic | 0.8336 | pathogenic | -0.655 | Destabilizing | 0.999 | D | 0.613 | neutral | None | None | None | None | N |
S/P | 0.9983 | likely_pathogenic | 0.9982 | pathogenic | -0.264 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | D | 0.562742651 | None | None | N |
S/Q | 0.9703 | likely_pathogenic | 0.9689 | pathogenic | -0.724 | Destabilizing | 0.999 | D | 0.609 | neutral | None | None | None | None | N |
S/R | 0.993 | likely_pathogenic | 0.9927 | pathogenic | -0.582 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
S/T | 0.2068 | likely_benign | 0.2171 | benign | -0.637 | Destabilizing | 0.99 | D | 0.581 | neutral | N | 0.494387374 | None | None | N |
S/V | 0.7673 | likely_pathogenic | 0.7816 | pathogenic | -0.264 | Destabilizing | 0.996 | D | 0.735 | prob.delet. | None | None | None | None | N |
S/W | 0.9777 | likely_pathogenic | 0.975 | pathogenic | -0.81 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
S/Y | 0.9318 | likely_pathogenic | 0.9291 | pathogenic | -0.518 | Destabilizing | 0.999 | D | 0.779 | deleterious | D | 0.580827588 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.