Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13775 | 41548;41549;41550 | chr2:178636404;178636403;178636402 | chr2:179501131;179501130;179501129 |
N2AB | 12134 | 36625;36626;36627 | chr2:178636404;178636403;178636402 | chr2:179501131;179501130;179501129 |
N2A | 11207 | 33844;33845;33846 | chr2:178636404;178636403;178636402 | chr2:179501131;179501130;179501129 |
N2B | 4710 | 14353;14354;14355 | chr2:178636404;178636403;178636402 | chr2:179501131;179501130;179501129 |
Novex-1 | 4835 | 14728;14729;14730 | chr2:178636404;178636403;178636402 | chr2:179501131;179501130;179501129 |
Novex-2 | 4902 | 14929;14930;14931 | chr2:178636404;178636403;178636402 | chr2:179501131;179501130;179501129 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | None | None | 1.0 | D | 0.756 | 0.841 | 0.905287540064 | gnomAD-4.0.0 | 1.61995E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.90757E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7955 | likely_pathogenic | 0.7964 | pathogenic | -1.407 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | D | 0.762547304 | None | None | I |
V/C | 0.9741 | likely_pathogenic | 0.9712 | pathogenic | -0.987 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
V/D | 0.996 | likely_pathogenic | 0.9956 | pathogenic | -1.202 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
V/E | 0.9835 | likely_pathogenic | 0.9826 | pathogenic | -1.068 | Destabilizing | 1.0 | D | 0.756 | deleterious | D | 0.761821382 | None | None | I |
V/F | 0.8354 | likely_pathogenic | 0.8258 | pathogenic | -0.723 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | I |
V/G | 0.9284 | likely_pathogenic | 0.9235 | pathogenic | -1.854 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | D | 0.761821382 | None | None | I |
V/H | 0.9943 | likely_pathogenic | 0.9945 | pathogenic | -1.397 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | I |
V/I | 0.1262 | likely_benign | 0.1362 | benign | -0.225 | Destabilizing | 0.997 | D | 0.703 | prob.neutral | D | 0.580578592 | None | None | I |
V/K | 0.973 | likely_pathogenic | 0.9764 | pathogenic | -1.192 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
V/L | 0.7316 | likely_pathogenic | 0.729 | pathogenic | -0.225 | Destabilizing | 0.997 | D | 0.731 | prob.delet. | D | 0.634599555 | None | None | I |
V/M | 0.727 | likely_pathogenic | 0.7295 | pathogenic | -0.282 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | I |
V/N | 0.9853 | likely_pathogenic | 0.9844 | pathogenic | -1.277 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
V/P | 0.9837 | likely_pathogenic | 0.9788 | pathogenic | -0.585 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | I |
V/Q | 0.978 | likely_pathogenic | 0.9767 | pathogenic | -1.213 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | I |
V/R | 0.9569 | likely_pathogenic | 0.9598 | pathogenic | -0.945 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
V/S | 0.9459 | likely_pathogenic | 0.9406 | pathogenic | -1.921 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | I |
V/T | 0.8005 | likely_pathogenic | 0.7995 | pathogenic | -1.65 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | I |
V/W | 0.996 | likely_pathogenic | 0.9957 | pathogenic | -1.087 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
V/Y | 0.986 | likely_pathogenic | 0.9854 | pathogenic | -0.692 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.