Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13780 | 41563;41564;41565 | chr2:178636233;178636232;178636231 | chr2:179500960;179500959;179500958 |
N2AB | 12139 | 36640;36641;36642 | chr2:178636233;178636232;178636231 | chr2:179500960;179500959;179500958 |
N2A | 11212 | 33859;33860;33861 | chr2:178636233;178636232;178636231 | chr2:179500960;179500959;179500958 |
N2B | 4715 | 14368;14369;14370 | chr2:178636233;178636232;178636231 | chr2:179500960;179500959;179500958 |
Novex-1 | 4840 | 14743;14744;14745 | chr2:178636233;178636232;178636231 | chr2:179500960;179500959;179500958 |
Novex-2 | 4907 | 14944;14945;14946 | chr2:178636233;178636232;178636231 | chr2:179500960;179500959;179500958 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.994 | N | 0.475 | 0.288 | 0.388174495139 | gnomAD-4.0.0 | 1.72771E-06 | None | None | None | None | N | None | 0 | 0 | None | 5.38329E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7164 | likely_pathogenic | 0.7103 | pathogenic | -0.769 | Destabilizing | 0.997 | D | 0.431 | neutral | N | 0.341573703 | None | None | N |
V/C | 0.9519 | likely_pathogenic | 0.9467 | pathogenic | -0.873 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
V/D | 0.9614 | likely_pathogenic | 0.958 | pathogenic | -0.643 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
V/E | 0.9101 | likely_pathogenic | 0.9046 | pathogenic | -0.676 | Destabilizing | 0.999 | D | 0.707 | prob.delet. | N | 0.40696698 | None | None | N |
V/F | 0.7247 | likely_pathogenic | 0.6734 | pathogenic | -0.644 | Destabilizing | 0.999 | D | 0.701 | prob.delet. | None | None | None | None | N |
V/G | 0.8596 | likely_pathogenic | 0.8474 | pathogenic | -0.987 | Destabilizing | 0.999 | D | 0.689 | prob.delet. | N | 0.40839799 | None | None | N |
V/H | 0.9874 | likely_pathogenic | 0.9852 | pathogenic | -0.365 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
V/I | 0.108 | likely_benign | 0.1102 | benign | -0.296 | Destabilizing | 0.995 | D | 0.496 | neutral | None | None | None | None | N |
V/K | 0.9734 | likely_pathogenic | 0.9717 | pathogenic | -0.771 | Destabilizing | 0.999 | D | 0.704 | prob.delet. | None | None | None | None | N |
V/L | 0.5204 | ambiguous | 0.5262 | ambiguous | -0.296 | Destabilizing | 0.994 | D | 0.475 | neutral | N | 0.323178924 | None | None | N |
V/M | 0.5667 | likely_pathogenic | 0.5455 | ambiguous | -0.575 | Destabilizing | 0.999 | D | 0.703 | prob.delet. | N | 0.40839799 | None | None | N |
V/N | 0.9246 | likely_pathogenic | 0.9196 | pathogenic | -0.629 | Destabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
V/P | 0.8289 | likely_pathogenic | 0.8315 | pathogenic | -0.42 | Destabilizing | 0.999 | D | 0.733 | deleterious | None | None | None | None | N |
V/Q | 0.9487 | likely_pathogenic | 0.9422 | pathogenic | -0.769 | Destabilizing | 0.999 | D | 0.79 | deleterious | None | None | None | None | N |
V/R | 0.9585 | likely_pathogenic | 0.954 | pathogenic | -0.296 | Destabilizing | 0.999 | D | 0.778 | deleterious | None | None | None | None | N |
V/S | 0.8471 | likely_pathogenic | 0.8347 | pathogenic | -1.038 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
V/T | 0.7247 | likely_pathogenic | 0.717 | pathogenic | -0.956 | Destabilizing | 0.998 | D | 0.627 | neutral | None | None | None | None | N |
V/W | 0.9912 | likely_pathogenic | 0.9894 | pathogenic | -0.755 | Destabilizing | 1.0 | D | 0.703 | prob.delet. | None | None | None | None | N |
V/Y | 0.9652 | likely_pathogenic | 0.956 | pathogenic | -0.47 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.