Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13783 | 41572;41573;41574 | chr2:178636224;178636223;178636222 | chr2:179500951;179500950;179500949 |
N2AB | 12142 | 36649;36650;36651 | chr2:178636224;178636223;178636222 | chr2:179500951;179500950;179500949 |
N2A | 11215 | 33868;33869;33870 | chr2:178636224;178636223;178636222 | chr2:179500951;179500950;179500949 |
N2B | 4718 | 14377;14378;14379 | chr2:178636224;178636223;178636222 | chr2:179500951;179500950;179500949 |
Novex-1 | 4843 | 14752;14753;14754 | chr2:178636224;178636223;178636222 | chr2:179500951;179500950;179500949 |
Novex-2 | 4910 | 14953;14954;14955 | chr2:178636224;178636223;178636222 | chr2:179500951;179500950;179500949 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs2060418351 | None | 0.826 | N | 0.394 | 0.125 | 0.381409048467 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/A | rs2060418351 | None | 0.826 | N | 0.394 | 0.125 | 0.381409048467 | gnomAD-4.0.0 | 6.5754E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47059E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4846 | ambiguous | 0.6928 | pathogenic | -1.004 | Destabilizing | 0.826 | D | 0.394 | neutral | N | 0.344138718 | None | None | N |
V/C | 0.8949 | likely_pathogenic | 0.9354 | pathogenic | -0.709 | Destabilizing | 0.999 | D | 0.478 | neutral | None | None | None | None | N |
V/D | 0.7753 | likely_pathogenic | 0.9256 | pathogenic | -0.626 | Destabilizing | 0.991 | D | 0.673 | prob.neutral | None | None | None | None | N |
V/E | 0.5482 | ambiguous | 0.7666 | pathogenic | -0.679 | Destabilizing | 0.92 | D | 0.611 | neutral | N | 0.366708356 | None | None | N |
V/F | 0.3747 | ambiguous | 0.5608 | ambiguous | -0.818 | Destabilizing | 0.982 | D | 0.523 | neutral | None | None | None | None | N |
V/G | 0.5187 | ambiguous | 0.7298 | pathogenic | -1.244 | Destabilizing | 0.959 | D | 0.673 | prob.neutral | N | 0.320374607 | None | None | N |
V/H | 0.8516 | likely_pathogenic | 0.9371 | pathogenic | -0.642 | Destabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | N |
V/I | 0.0962 | likely_benign | 0.1086 | benign | -0.48 | Destabilizing | 0.061 | N | 0.107 | neutral | N | 0.352263308 | None | None | N |
V/K | 0.6355 | likely_pathogenic | 0.8265 | pathogenic | -0.844 | Destabilizing | 0.884 | D | 0.626 | neutral | None | None | None | None | N |
V/L | 0.3197 | likely_benign | 0.455 | ambiguous | -0.48 | Destabilizing | 0.509 | D | 0.284 | neutral | N | 0.346381716 | None | None | N |
V/M | 0.2979 | likely_benign | 0.4342 | ambiguous | -0.415 | Destabilizing | 0.579 | D | 0.285 | neutral | None | None | None | None | N |
V/N | 0.6407 | likely_pathogenic | 0.8117 | pathogenic | -0.596 | Destabilizing | 0.991 | D | 0.661 | prob.neutral | None | None | None | None | N |
V/P | 0.9481 | likely_pathogenic | 0.975 | pathogenic | -0.618 | Destabilizing | 0.997 | D | 0.625 | neutral | None | None | None | None | N |
V/Q | 0.5556 | ambiguous | 0.7282 | pathogenic | -0.811 | Destabilizing | 0.982 | D | 0.619 | neutral | None | None | None | None | N |
V/R | 0.5544 | ambiguous | 0.7507 | pathogenic | -0.263 | Destabilizing | 0.1 | N | 0.43 | neutral | None | None | None | None | N |
V/S | 0.5057 | ambiguous | 0.7101 | pathogenic | -1.071 | Destabilizing | 0.884 | D | 0.575 | neutral | None | None | None | None | N |
V/T | 0.354 | ambiguous | 0.5199 | ambiguous | -1.02 | Destabilizing | 0.17 | N | 0.228 | neutral | None | None | None | None | N |
V/W | 0.9432 | likely_pathogenic | 0.9784 | pathogenic | -0.927 | Destabilizing | 0.999 | D | 0.696 | prob.delet. | None | None | None | None | N |
V/Y | 0.8339 | likely_pathogenic | 0.9192 | pathogenic | -0.652 | Destabilizing | 0.997 | D | 0.521 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.