Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13785 | 41578;41579;41580 | chr2:178636218;178636217;178636216 | chr2:179500945;179500944;179500943 |
N2AB | 12144 | 36655;36656;36657 | chr2:178636218;178636217;178636216 | chr2:179500945;179500944;179500943 |
N2A | 11217 | 33874;33875;33876 | chr2:178636218;178636217;178636216 | chr2:179500945;179500944;179500943 |
N2B | 4720 | 14383;14384;14385 | chr2:178636218;178636217;178636216 | chr2:179500945;179500944;179500943 |
Novex-1 | 4845 | 14758;14759;14760 | chr2:178636218;178636217;178636216 | chr2:179500945;179500944;179500943 |
Novex-2 | 4912 | 14959;14960;14961 | chr2:178636218;178636217;178636216 | chr2:179500945;179500944;179500943 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.953 | N | 0.506 | 0.185 | 0.264547087235 | gnomAD-4.0.0 | 2.09016E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.73468E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1355 | likely_benign | 0.162 | benign | -0.799 | Destabilizing | 0.953 | D | 0.506 | neutral | N | 0.497969762 | None | None | N |
T/C | 0.6394 | likely_pathogenic | 0.6884 | pathogenic | -0.407 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | N |
T/D | 0.5933 | likely_pathogenic | 0.6705 | pathogenic | 0.317 | Stabilizing | 0.971 | D | 0.641 | neutral | None | None | None | None | N |
T/E | 0.3897 | ambiguous | 0.4707 | ambiguous | 0.313 | Stabilizing | 0.271 | N | 0.319 | neutral | None | None | None | None | N |
T/F | 0.4856 | ambiguous | 0.5562 | ambiguous | -0.89 | Destabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | N |
T/G | 0.4108 | ambiguous | 0.435 | ambiguous | -1.045 | Destabilizing | 0.993 | D | 0.728 | deleterious | None | None | None | None | N |
T/H | 0.4101 | ambiguous | 0.4942 | ambiguous | -1.258 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
T/I | 0.3365 | likely_benign | 0.398 | ambiguous | -0.239 | Destabilizing | 0.999 | D | 0.682 | prob.neutral | N | 0.492155349 | None | None | N |
T/K | 0.2691 | likely_benign | 0.3138 | benign | -0.514 | Destabilizing | 0.98 | D | 0.657 | prob.neutral | N | 0.447812794 | None | None | N |
T/L | 0.1769 | likely_benign | 0.2036 | benign | -0.239 | Destabilizing | 0.993 | D | 0.626 | neutral | None | None | None | None | N |
T/M | 0.1118 | likely_benign | 0.1326 | benign | -0.051 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | N |
T/N | 0.1854 | likely_benign | 0.2092 | benign | -0.37 | Destabilizing | 0.993 | D | 0.569 | neutral | None | None | None | None | N |
T/P | 0.1139 | likely_benign | 0.142 | benign | -0.394 | Destabilizing | 0.999 | D | 0.682 | prob.neutral | N | 0.471144524 | None | None | N |
T/Q | 0.3016 | likely_benign | 0.3505 | ambiguous | -0.504 | Destabilizing | 0.996 | D | 0.694 | prob.delet. | None | None | None | None | N |
T/R | 0.2498 | likely_benign | 0.3083 | benign | -0.345 | Destabilizing | 0.994 | D | 0.679 | prob.neutral | N | 0.491831085 | None | None | N |
T/S | 0.2109 | likely_benign | 0.2411 | benign | -0.729 | Destabilizing | 0.953 | D | 0.548 | neutral | N | 0.489905861 | None | None | N |
T/V | 0.2493 | likely_benign | 0.2754 | benign | -0.394 | Destabilizing | 0.993 | D | 0.532 | neutral | None | None | None | None | N |
T/W | 0.8325 | likely_pathogenic | 0.8798 | pathogenic | -0.801 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
T/Y | 0.4769 | ambiguous | 0.5641 | pathogenic | -0.569 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.