Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13787 | 41584;41585;41586 | chr2:178636212;178636211;178636210 | chr2:179500939;179500938;179500937 |
N2AB | 12146 | 36661;36662;36663 | chr2:178636212;178636211;178636210 | chr2:179500939;179500938;179500937 |
N2A | 11219 | 33880;33881;33882 | chr2:178636212;178636211;178636210 | chr2:179500939;179500938;179500937 |
N2B | 4722 | 14389;14390;14391 | chr2:178636212;178636211;178636210 | chr2:179500939;179500938;179500937 |
Novex-1 | 4847 | 14764;14765;14766 | chr2:178636212;178636211;178636210 | chr2:179500939;179500938;179500937 |
Novex-2 | 4914 | 14965;14966;14967 | chr2:178636212;178636211;178636210 | chr2:179500939;179500938;179500937 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.999 | D | 0.726 | 0.262 | 0.455909487837 | gnomAD-4.0.0 | 1.64349E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.49651E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.398 | ambiguous | 0.5356 | ambiguous | -0.344 | Destabilizing | 0.998 | D | 0.743 | deleterious | D | 0.607782103 | None | None | N |
E/C | 0.9688 | likely_pathogenic | 0.9803 | pathogenic | -0.072 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
E/D | 0.263 | likely_benign | 0.4072 | ambiguous | -0.321 | Destabilizing | 0.434 | N | 0.249 | neutral | N | 0.513295134 | None | None | N |
E/F | 0.9703 | likely_pathogenic | 0.9852 | pathogenic | -0.124 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/G | 0.3658 | ambiguous | 0.5039 | ambiguous | -0.552 | Destabilizing | 0.999 | D | 0.706 | prob.delet. | D | 0.608917928 | None | None | N |
E/H | 0.8613 | likely_pathogenic | 0.9222 | pathogenic | 0.097 | Stabilizing | 1.0 | D | 0.689 | prob.delet. | None | None | None | None | N |
E/I | 0.8506 | likely_pathogenic | 0.9201 | pathogenic | 0.173 | Stabilizing | 1.0 | D | 0.733 | deleterious | None | None | None | None | N |
E/K | 0.4632 | ambiguous | 0.6405 | pathogenic | 0.395 | Stabilizing | 0.998 | D | 0.669 | prob.neutral | N | 0.515594935 | None | None | N |
E/L | 0.782 | likely_pathogenic | 0.8665 | pathogenic | 0.173 | Stabilizing | 1.0 | D | 0.726 | deleterious | None | None | None | None | N |
E/M | 0.8551 | likely_pathogenic | 0.914 | pathogenic | 0.222 | Stabilizing | 1.0 | D | 0.733 | deleterious | None | None | None | None | N |
E/N | 0.6322 | likely_pathogenic | 0.8026 | pathogenic | -0.033 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
E/P | 0.7693 | likely_pathogenic | 0.8105 | pathogenic | 0.021 | Stabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
E/Q | 0.3372 | likely_benign | 0.4496 | ambiguous | 0.027 | Stabilizing | 0.999 | D | 0.726 | deleterious | D | 0.522536008 | None | None | N |
E/R | 0.6098 | likely_pathogenic | 0.7331 | pathogenic | 0.591 | Stabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
E/S | 0.4902 | ambiguous | 0.6429 | pathogenic | -0.171 | Destabilizing | 0.997 | D | 0.665 | prob.neutral | None | None | None | None | N |
E/T | 0.5863 | likely_pathogenic | 0.7356 | pathogenic | 0.008 | Stabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
E/V | 0.6332 | likely_pathogenic | 0.7577 | pathogenic | 0.021 | Stabilizing | 1.0 | D | 0.736 | deleterious | D | 0.585618011 | None | None | N |
E/W | 0.9841 | likely_pathogenic | 0.9913 | pathogenic | 0.055 | Stabilizing | 1.0 | D | 0.728 | deleterious | None | None | None | None | N |
E/Y | 0.9315 | likely_pathogenic | 0.9664 | pathogenic | 0.13 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.