Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1379 | 4360;4361;4362 | chr2:178778947;178778946;178778945 | chr2:179643674;179643673;179643672 |
N2AB | 1379 | 4360;4361;4362 | chr2:178778947;178778946;178778945 | chr2:179643674;179643673;179643672 |
N2A | 1379 | 4360;4361;4362 | chr2:178778947;178778946;178778945 | chr2:179643674;179643673;179643672 |
N2B | 1333 | 4222;4223;4224 | chr2:178778947;178778946;178778945 | chr2:179643674;179643673;179643672 |
Novex-1 | 1333 | 4222;4223;4224 | chr2:178778947;178778946;178778945 | chr2:179643674;179643673;179643672 |
Novex-2 | 1333 | 4222;4223;4224 | chr2:178778947;178778946;178778945 | chr2:179643674;179643673;179643672 |
Novex-3 | 1379 | 4360;4361;4362 | chr2:178778947;178778946;178778945 | chr2:179643674;179643673;179643672 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs1204391475 | None | 0.999 | D | 0.596 | 0.368 | 0.307332253619 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/V | rs1204391475 | None | 0.999 | D | 0.596 | 0.368 | 0.307332253619 | gnomAD-4.0.0 | 3.84239E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.17666E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9811 | likely_pathogenic | 0.9854 | pathogenic | -2.586 | Highly Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
L/C | 0.9776 | likely_pathogenic | 0.9824 | pathogenic | -1.374 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -3.189 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
L/E | 0.999 | likely_pathogenic | 0.9991 | pathogenic | -2.859 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/F | 0.9385 | likely_pathogenic | 0.9626 | pathogenic | -1.603 | Destabilizing | 1.0 | D | 0.841 | deleterious | D | 0.676942219 | None | None | N |
L/G | 0.9965 | likely_pathogenic | 0.9972 | pathogenic | -3.181 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/H | 0.9985 | likely_pathogenic | 0.9989 | pathogenic | -3.023 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
L/I | 0.3609 | ambiguous | 0.4009 | ambiguous | -0.78 | Destabilizing | 0.999 | D | 0.597 | neutral | None | None | None | None | N |
L/K | 0.9983 | likely_pathogenic | 0.9985 | pathogenic | -1.84 | Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
L/M | 0.686 | likely_pathogenic | 0.7361 | pathogenic | -0.867 | Destabilizing | 1.0 | D | 0.81 | deleterious | D | 0.678097715 | None | None | N |
L/N | 0.9987 | likely_pathogenic | 0.9987 | pathogenic | -2.624 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
L/P | 0.9995 | likely_pathogenic | 0.9996 | pathogenic | -1.376 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/Q | 0.9976 | likely_pathogenic | 0.9983 | pathogenic | -2.201 | Highly Destabilizing | 1.0 | D | 0.912 | deleterious | None | None | None | None | N |
L/R | 0.9956 | likely_pathogenic | 0.9965 | pathogenic | -2.088 | Highly Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
L/S | 0.9989 | likely_pathogenic | 0.9991 | pathogenic | -3.056 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | D | 0.774424268 | None | None | N |
L/T | 0.993 | likely_pathogenic | 0.9938 | pathogenic | -2.561 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
L/V | 0.4933 | ambiguous | 0.5552 | ambiguous | -1.376 | Destabilizing | 0.999 | D | 0.596 | neutral | D | 0.536299019 | None | None | N |
L/W | 0.9969 | likely_pathogenic | 0.9979 | pathogenic | -1.948 | Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.774424268 | None | None | N |
L/Y | 0.994 | likely_pathogenic | 0.9957 | pathogenic | -1.769 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.