Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13790 | 41593;41594;41595 | chr2:178636203;178636202;178636201 | chr2:179500930;179500929;179500928 |
N2AB | 12149 | 36670;36671;36672 | chr2:178636203;178636202;178636201 | chr2:179500930;179500929;179500928 |
N2A | 11222 | 33889;33890;33891 | chr2:178636203;178636202;178636201 | chr2:179500930;179500929;179500928 |
N2B | 4725 | 14398;14399;14400 | chr2:178636203;178636202;178636201 | chr2:179500930;179500929;179500928 |
Novex-1 | 4850 | 14773;14774;14775 | chr2:178636203;178636202;178636201 | chr2:179500930;179500929;179500928 |
Novex-2 | 4917 | 14974;14975;14976 | chr2:178636203;178636202;178636201 | chr2:179500930;179500929;179500928 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.101 | N | 0.287 | 0.139 | 0.238096912614 | gnomAD-4.0.0 | 1.37878E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80965E-06 | 0 | 0 |
V/G | None | None | 0.351 | N | 0.648 | 0.142 | 0.397391247328 | gnomAD-4.0.0 | 6.8939E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88388E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5633 | ambiguous | 0.666 | pathogenic | -1.354 | Destabilizing | 0.101 | N | 0.287 | neutral | N | 0.327155615 | None | None | N |
V/C | 0.9292 | likely_pathogenic | 0.9395 | pathogenic | -1.048 | Destabilizing | 0.983 | D | 0.389 | neutral | None | None | None | None | N |
V/D | 0.829 | likely_pathogenic | 0.8774 | pathogenic | -1.155 | Destabilizing | 0.213 | N | 0.655 | prob.neutral | N | 0.379527999 | None | None | N |
V/E | 0.6319 | likely_pathogenic | 0.7152 | pathogenic | -1.174 | Destabilizing | 0.002 | N | 0.331 | neutral | None | None | None | None | N |
V/F | 0.4326 | ambiguous | 0.5306 | ambiguous | -1.064 | Destabilizing | 0.655 | D | 0.527 | neutral | N | 0.414191682 | None | None | N |
V/G | 0.6219 | likely_pathogenic | 0.6902 | pathogenic | -1.654 | Destabilizing | 0.351 | N | 0.648 | neutral | N | 0.414810211 | None | None | N |
V/H | 0.8995 | likely_pathogenic | 0.9298 | pathogenic | -1.165 | Destabilizing | 0.951 | D | 0.545 | neutral | None | None | None | None | N |
V/I | 0.1156 | likely_benign | 0.126 | benign | -0.644 | Destabilizing | 0.007 | N | 0.193 | neutral | N | 0.347634273 | None | None | N |
V/K | 0.7078 | likely_pathogenic | 0.7735 | pathogenic | -1.216 | Destabilizing | 0.264 | N | 0.557 | neutral | None | None | None | None | N |
V/L | 0.5552 | ambiguous | 0.6314 | pathogenic | -0.644 | Destabilizing | 0.001 | N | 0.074 | neutral | N | 0.34901194 | None | None | N |
V/M | 0.3178 | likely_benign | 0.3798 | ambiguous | -0.538 | Destabilizing | 0.061 | N | 0.281 | neutral | None | None | None | None | N |
V/N | 0.6791 | likely_pathogenic | 0.7436 | pathogenic | -0.975 | Destabilizing | 0.716 | D | 0.667 | prob.neutral | None | None | None | None | N |
V/P | 0.9812 | likely_pathogenic | 0.9854 | pathogenic | -0.845 | Destabilizing | 0.836 | D | 0.614 | neutral | None | None | None | None | N |
V/Q | 0.6668 | likely_pathogenic | 0.7317 | pathogenic | -1.163 | Destabilizing | 0.557 | D | 0.626 | neutral | None | None | None | None | N |
V/R | 0.7187 | likely_pathogenic | 0.7785 | pathogenic | -0.665 | Destabilizing | 0.716 | D | 0.677 | prob.neutral | None | None | None | None | N |
V/S | 0.6962 | likely_pathogenic | 0.7682 | pathogenic | -1.487 | Destabilizing | 0.264 | N | 0.492 | neutral | None | None | None | None | N |
V/T | 0.4627 | ambiguous | 0.5341 | ambiguous | -1.394 | Destabilizing | 0.004 | N | 0.069 | neutral | None | None | None | None | N |
V/W | 0.9661 | likely_pathogenic | 0.9766 | pathogenic | -1.209 | Destabilizing | 0.983 | D | 0.554 | neutral | None | None | None | None | N |
V/Y | 0.8158 | likely_pathogenic | 0.8594 | pathogenic | -0.938 | Destabilizing | 0.836 | D | 0.477 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.