Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13794 | 41605;41606;41607 | chr2:178636191;178636190;178636189 | chr2:179500918;179500917;179500916 |
N2AB | 12153 | 36682;36683;36684 | chr2:178636191;178636190;178636189 | chr2:179500918;179500917;179500916 |
N2A | 11226 | 33901;33902;33903 | chr2:178636191;178636190;178636189 | chr2:179500918;179500917;179500916 |
N2B | 4729 | 14410;14411;14412 | chr2:178636191;178636190;178636189 | chr2:179500918;179500917;179500916 |
Novex-1 | 4854 | 14785;14786;14787 | chr2:178636191;178636190;178636189 | chr2:179500918;179500917;179500916 |
Novex-2 | 4921 | 14986;14987;14988 | chr2:178636191;178636190;178636189 | chr2:179500918;179500917;179500916 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs944123089 | -0.05 | 0.1 | N | 0.276 | 0.119 | 0.148003135375 | gnomAD-2.1.1 | 8.18E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.81E-05 | 0 |
K/R | rs944123089 | -0.05 | 0.1 | N | 0.276 | 0.119 | 0.148003135375 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/R | rs944123089 | -0.05 | 0.1 | N | 0.276 | 0.119 | 0.148003135375 | gnomAD-4.0.0 | 3.7294E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.09773E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7879 | likely_pathogenic | 0.8751 | pathogenic | -0.207 | Destabilizing | 0.953 | D | 0.456 | neutral | None | None | None | None | N |
K/C | 0.9378 | likely_pathogenic | 0.9624 | pathogenic | -0.298 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
K/D | 0.9612 | likely_pathogenic | 0.9814 | pathogenic | 0.064 | Stabilizing | 0.91 | D | 0.43 | neutral | None | None | None | None | N |
K/E | 0.6004 | likely_pathogenic | 0.7752 | pathogenic | 0.117 | Stabilizing | 0.17 | N | 0.264 | neutral | N | 0.337449284 | None | None | N |
K/F | 0.9846 | likely_pathogenic | 0.9933 | pathogenic | -0.126 | Destabilizing | 0.999 | D | 0.663 | prob.neutral | None | None | None | None | N |
K/G | 0.9195 | likely_pathogenic | 0.9552 | pathogenic | -0.5 | Destabilizing | 0.976 | D | 0.393 | neutral | None | None | None | None | N |
K/H | 0.7472 | likely_pathogenic | 0.8303 | pathogenic | -0.833 | Destabilizing | 0.998 | D | 0.387 | neutral | None | None | None | None | N |
K/I | 0.8464 | likely_pathogenic | 0.9253 | pathogenic | 0.511 | Stabilizing | 0.991 | D | 0.725 | deleterious | N | 0.331915237 | None | None | N |
K/L | 0.8077 | likely_pathogenic | 0.89 | pathogenic | 0.511 | Stabilizing | 0.986 | D | 0.387 | neutral | None | None | None | None | N |
K/M | 0.7137 | likely_pathogenic | 0.8325 | pathogenic | 0.321 | Stabilizing | 0.999 | D | 0.413 | neutral | None | None | None | None | N |
K/N | 0.8953 | likely_pathogenic | 0.9449 | pathogenic | -0.037 | Destabilizing | 0.982 | D | 0.419 | neutral | N | 0.370403836 | None | None | N |
K/P | 0.9113 | likely_pathogenic | 0.9495 | pathogenic | 0.302 | Stabilizing | 0.998 | D | 0.417 | neutral | None | None | None | None | N |
K/Q | 0.407 | ambiguous | 0.5448 | ambiguous | -0.176 | Destabilizing | 0.982 | D | 0.441 | neutral | N | 0.33987913 | None | None | N |
K/R | 0.1165 | likely_benign | 0.1401 | benign | -0.319 | Destabilizing | 0.1 | N | 0.276 | neutral | N | 0.310402766 | None | None | N |
K/S | 0.8819 | likely_pathogenic | 0.9348 | pathogenic | -0.609 | Destabilizing | 0.953 | D | 0.461 | neutral | None | None | None | None | N |
K/T | 0.7243 | likely_pathogenic | 0.8388 | pathogenic | -0.378 | Destabilizing | 0.991 | D | 0.403 | neutral | N | 0.330871093 | None | None | N |
K/V | 0.8146 | likely_pathogenic | 0.8937 | pathogenic | 0.302 | Stabilizing | 0.993 | D | 0.529 | neutral | None | None | None | None | N |
K/W | 0.9745 | likely_pathogenic | 0.9869 | pathogenic | -0.056 | Destabilizing | 0.999 | D | 0.76 | deleterious | None | None | None | None | N |
K/Y | 0.9509 | likely_pathogenic | 0.9735 | pathogenic | 0.253 | Stabilizing | 0.998 | D | 0.611 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.