Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13797 | 41614;41615;41616 | chr2:178636182;178636181;178636180 | chr2:179500909;179500908;179500907 |
N2AB | 12156 | 36691;36692;36693 | chr2:178636182;178636181;178636180 | chr2:179500909;179500908;179500907 |
N2A | 11229 | 33910;33911;33912 | chr2:178636182;178636181;178636180 | chr2:179500909;179500908;179500907 |
N2B | 4732 | 14419;14420;14421 | chr2:178636182;178636181;178636180 | chr2:179500909;179500908;179500907 |
Novex-1 | 4857 | 14794;14795;14796 | chr2:178636182;178636181;178636180 | chr2:179500909;179500908;179500907 |
Novex-2 | 4924 | 14995;14996;14997 | chr2:178636182;178636181;178636180 | chr2:179500909;179500908;179500907 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1205515315 | -0.436 | 0.999 | N | 0.741 | 0.363 | 0.297375071883 | gnomAD-4.0.0 | 2.74024E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.60086E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2816 | likely_benign | 0.3436 | ambiguous | -1.427 | Destabilizing | 0.998 | D | 0.693 | prob.delet. | N | 0.357346075 | None | None | N |
P/C | 0.9179 | likely_pathogenic | 0.9525 | pathogenic | -0.877 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
P/D | 0.9115 | likely_pathogenic | 0.9441 | pathogenic | -1.191 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
P/E | 0.8367 | likely_pathogenic | 0.8971 | pathogenic | -1.197 | Destabilizing | 0.999 | D | 0.69 | prob.delet. | None | None | None | None | N |
P/F | 0.9281 | likely_pathogenic | 0.9626 | pathogenic | -1.143 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
P/G | 0.7907 | likely_pathogenic | 0.8503 | pathogenic | -1.738 | Destabilizing | 1.0 | D | 0.666 | prob.neutral | None | None | None | None | N |
P/H | 0.6962 | likely_pathogenic | 0.7982 | pathogenic | -1.247 | Destabilizing | 0.844 | D | 0.418 | neutral | None | None | None | None | N |
P/I | 0.8249 | likely_pathogenic | 0.8897 | pathogenic | -0.678 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
P/K | 0.8493 | likely_pathogenic | 0.9128 | pathogenic | -1.129 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
P/L | 0.4883 | ambiguous | 0.6175 | pathogenic | -0.678 | Destabilizing | 0.999 | D | 0.741 | deleterious | N | 0.316959638 | None | None | N |
P/M | 0.7892 | likely_pathogenic | 0.8625 | pathogenic | -0.48 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
P/N | 0.8317 | likely_pathogenic | 0.8931 | pathogenic | -0.891 | Destabilizing | 0.999 | D | 0.792 | deleterious | None | None | None | None | N |
P/Q | 0.6579 | likely_pathogenic | 0.761 | pathogenic | -1.071 | Destabilizing | 0.999 | D | 0.768 | deleterious | N | 0.316590502 | None | None | N |
P/R | 0.7067 | likely_pathogenic | 0.8129 | pathogenic | -0.585 | Destabilizing | 0.999 | D | 0.753 | deleterious | N | 0.332477649 | None | None | N |
P/S | 0.4996 | ambiguous | 0.6007 | pathogenic | -1.408 | Destabilizing | 0.999 | D | 0.661 | prob.neutral | N | 0.345671811 | None | None | N |
P/T | 0.4667 | ambiguous | 0.5786 | pathogenic | -1.303 | Destabilizing | 1.0 | D | 0.801 | deleterious | N | 0.340485684 | None | None | N |
P/V | 0.6788 | likely_pathogenic | 0.77 | pathogenic | -0.892 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
P/W | 0.9697 | likely_pathogenic | 0.9838 | pathogenic | -1.32 | Destabilizing | 1.0 | D | 0.729 | deleterious | None | None | None | None | N |
P/Y | 0.9016 | likely_pathogenic | 0.9435 | pathogenic | -1.031 | Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.