Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1380 | 4363;4364;4365 | chr2:178778944;178778943;178778942 | chr2:179643671;179643670;179643669 |
N2AB | 1380 | 4363;4364;4365 | chr2:178778944;178778943;178778942 | chr2:179643671;179643670;179643669 |
N2A | 1380 | 4363;4364;4365 | chr2:178778944;178778943;178778942 | chr2:179643671;179643670;179643669 |
N2B | 1334 | 4225;4226;4227 | chr2:178778944;178778943;178778942 | chr2:179643671;179643670;179643669 |
Novex-1 | 1334 | 4225;4226;4227 | chr2:178778944;178778943;178778942 | chr2:179643671;179643670;179643669 |
Novex-2 | 1334 | 4225;4226;4227 | chr2:178778944;178778943;178778942 | chr2:179643671;179643670;179643669 |
Novex-3 | 1380 | 4363;4364;4365 | chr2:178778944;178778943;178778942 | chr2:179643671;179643670;179643669 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.757 | 0.459 | 0.730598733731 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8679 | likely_pathogenic | 0.903 | pathogenic | -2.122 | Highly Destabilizing | 0.998 | D | 0.663 | neutral | None | None | None | None | N |
Y/C | 0.6089 | likely_pathogenic | 0.6467 | pathogenic | -0.495 | Destabilizing | 1.0 | D | 0.757 | deleterious | D | 0.556594979 | None | None | N |
Y/D | 0.8916 | likely_pathogenic | 0.9035 | pathogenic | -0.809 | Destabilizing | 1.0 | D | 0.792 | deleterious | N | 0.480117014 | None | None | N |
Y/E | 0.9388 | likely_pathogenic | 0.9499 | pathogenic | -0.763 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
Y/F | 0.1317 | likely_benign | 0.1345 | benign | -1.041 | Destabilizing | 0.434 | N | 0.315 | neutral | N | 0.501326296 | None | None | N |
Y/G | 0.9075 | likely_pathogenic | 0.9304 | pathogenic | -2.408 | Highly Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
Y/H | 0.5353 | ambiguous | 0.5758 | pathogenic | -0.961 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | N | 0.484760861 | None | None | N |
Y/I | 0.7109 | likely_pathogenic | 0.7341 | pathogenic | -1.271 | Destabilizing | 0.999 | D | 0.675 | neutral | None | None | None | None | N |
Y/K | 0.9399 | likely_pathogenic | 0.9527 | pathogenic | -0.946 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
Y/L | 0.6181 | likely_pathogenic | 0.6736 | pathogenic | -1.271 | Destabilizing | 0.994 | D | 0.59 | neutral | None | None | None | None | N |
Y/M | 0.8127 | likely_pathogenic | 0.8366 | pathogenic | -0.78 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
Y/N | 0.6939 | likely_pathogenic | 0.7179 | pathogenic | -1.13 | Destabilizing | 1.0 | D | 0.775 | deleterious | N | 0.464699722 | None | None | N |
Y/P | 0.9913 | likely_pathogenic | 0.9944 | pathogenic | -1.548 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
Y/Q | 0.8815 | likely_pathogenic | 0.9105 | pathogenic | -1.128 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
Y/R | 0.8419 | likely_pathogenic | 0.8804 | pathogenic | -0.458 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
Y/S | 0.6467 | likely_pathogenic | 0.693 | pathogenic | -1.564 | Destabilizing | 1.0 | D | 0.755 | deleterious | N | 0.472719022 | None | None | N |
Y/T | 0.8014 | likely_pathogenic | 0.8177 | pathogenic | -1.432 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
Y/V | 0.6379 | likely_pathogenic | 0.6766 | pathogenic | -1.548 | Destabilizing | 0.997 | D | 0.67 | neutral | None | None | None | None | N |
Y/W | 0.6956 | likely_pathogenic | 0.7114 | pathogenic | -0.769 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.