Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13800 | 41623;41624;41625 | chr2:178636173;178636172;178636171 | chr2:179500900;179500899;179500898 |
N2AB | 12159 | 36700;36701;36702 | chr2:178636173;178636172;178636171 | chr2:179500900;179500899;179500898 |
N2A | 11232 | 33919;33920;33921 | chr2:178636173;178636172;178636171 | chr2:179500900;179500899;179500898 |
N2B | 4735 | 14428;14429;14430 | chr2:178636173;178636172;178636171 | chr2:179500900;179500899;179500898 |
Novex-1 | 4860 | 14803;14804;14805 | chr2:178636173;178636172;178636171 | chr2:179500900;179500899;179500898 |
Novex-2 | 4927 | 15004;15005;15006 | chr2:178636173;178636172;178636171 | chr2:179500900;179500899;179500898 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 0.998 | D | 0.888 | 0.482 | 0.705181888856 | gnomAD-4.0.0 | 6.8496E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00174E-07 | 0 | 0 |
L/W | rs2060414501 | None | 1.0 | D | 0.839 | 0.455 | 0.700816104296 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/W | rs2060414501 | None | 1.0 | D | 0.839 | 0.455 | 0.700816104296 | gnomAD-4.0.0 | 2.48176E-06 | None | None | None | None | N | None | 1.33615E-05 | 0 | None | 0 | 0 | None | 1.56499E-05 | 0 | 1.6968E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9768 | likely_pathogenic | 0.9865 | pathogenic | -1.769 | Destabilizing | 0.992 | D | 0.741 | deleterious | None | None | None | None | N |
L/C | 0.9663 | likely_pathogenic | 0.98 | pathogenic | -1.123 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
L/D | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | -1.624 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
L/E | 0.9973 | likely_pathogenic | 0.9981 | pathogenic | -1.366 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/F | 0.5119 | ambiguous | 0.6785 | pathogenic | -0.929 | Destabilizing | 0.997 | D | 0.735 | deleterious | N | 0.356360212 | None | None | N |
L/G | 0.996 | likely_pathogenic | 0.9973 | pathogenic | -2.301 | Highly Destabilizing | 0.999 | D | 0.902 | deleterious | None | None | None | None | N |
L/H | 0.9886 | likely_pathogenic | 0.993 | pathogenic | -1.716 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
L/I | 0.2977 | likely_benign | 0.3896 | ambiguous | -0.235 | Destabilizing | 0.983 | D | 0.615 | neutral | None | None | None | None | N |
L/K | 0.9927 | likely_pathogenic | 0.9941 | pathogenic | -1.145 | Destabilizing | 0.999 | D | 0.895 | deleterious | None | None | None | None | N |
L/M | 0.3993 | ambiguous | 0.4899 | ambiguous | -0.362 | Destabilizing | 0.948 | D | 0.46 | neutral | N | 0.436299967 | None | None | N |
L/N | 0.9977 | likely_pathogenic | 0.9983 | pathogenic | -1.609 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
L/P | 0.9982 | likely_pathogenic | 0.9987 | pathogenic | -0.727 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
L/Q | 0.9862 | likely_pathogenic | 0.9902 | pathogenic | -1.335 | Destabilizing | 0.999 | D | 0.89 | deleterious | None | None | None | None | N |
L/R | 0.9843 | likely_pathogenic | 0.9881 | pathogenic | -1.203 | Destabilizing | 0.999 | D | 0.88 | deleterious | None | None | None | None | N |
L/S | 0.9962 | likely_pathogenic | 0.9979 | pathogenic | -2.317 | Highly Destabilizing | 0.998 | D | 0.888 | deleterious | D | 0.534690513 | None | None | N |
L/T | 0.9864 | likely_pathogenic | 0.9918 | pathogenic | -1.89 | Destabilizing | 0.998 | D | 0.8 | deleterious | None | None | None | None | N |
L/V | 0.4451 | ambiguous | 0.5814 | pathogenic | -0.727 | Destabilizing | 0.543 | D | 0.38 | neutral | N | 0.419976553 | None | None | N |
L/W | 0.9634 | likely_pathogenic | 0.9816 | pathogenic | -1.203 | Destabilizing | 1.0 | D | 0.839 | deleterious | D | 0.534241836 | None | None | N |
L/Y | 0.9615 | likely_pathogenic | 0.9787 | pathogenic | -0.864 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.