Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13803 | 41632;41633;41634 | chr2:178636164;178636163;178636162 | chr2:179500891;179500890;179500889 |
N2AB | 12162 | 36709;36710;36711 | chr2:178636164;178636163;178636162 | chr2:179500891;179500890;179500889 |
N2A | 11235 | 33928;33929;33930 | chr2:178636164;178636163;178636162 | chr2:179500891;179500890;179500889 |
N2B | 4738 | 14437;14438;14439 | chr2:178636164;178636163;178636162 | chr2:179500891;179500890;179500889 |
Novex-1 | 4863 | 14812;14813;14814 | chr2:178636164;178636163;178636162 | chr2:179500891;179500890;179500889 |
Novex-2 | 4930 | 15013;15014;15015 | chr2:178636164;178636163;178636162 | chr2:179500891;179500890;179500889 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 1.0 | N | 0.626 | 0.29 | 0.15556083564 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 6.5189E-04 | None | 0 | None | 0 | 0 | 0 |
E/Q | None | None | 1.0 | N | 0.626 | 0.29 | 0.15556083564 | gnomAD-4.0.0 | 1.59369E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.7922E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5285 | ambiguous | 0.6547 | pathogenic | -1.036 | Destabilizing | 0.999 | D | 0.78 | deleterious | N | 0.410441379 | None | None | N |
E/C | 0.976 | likely_pathogenic | 0.9847 | pathogenic | -0.652 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
E/D | 0.7704 | likely_pathogenic | 0.8332 | pathogenic | -1.379 | Destabilizing | 0.999 | D | 0.641 | neutral | N | 0.35087159 | None | None | N |
E/F | 0.9562 | likely_pathogenic | 0.9737 | pathogenic | -0.578 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
E/G | 0.7493 | likely_pathogenic | 0.8435 | pathogenic | -1.43 | Destabilizing | 1.0 | D | 0.749 | deleterious | N | 0.390562713 | None | None | N |
E/H | 0.8979 | likely_pathogenic | 0.9367 | pathogenic | -0.934 | Destabilizing | 1.0 | D | 0.685 | prob.delet. | None | None | None | None | N |
E/I | 0.7147 | likely_pathogenic | 0.7986 | pathogenic | 0.058 | Stabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
E/K | 0.5749 | likely_pathogenic | 0.7363 | pathogenic | -1.058 | Destabilizing | 1.0 | D | 0.7 | prob.delet. | N | 0.345272507 | None | None | N |
E/L | 0.836 | likely_pathogenic | 0.8942 | pathogenic | 0.058 | Stabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
E/M | 0.7897 | likely_pathogenic | 0.8594 | pathogenic | 0.64 | Stabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
E/N | 0.8647 | likely_pathogenic | 0.9145 | pathogenic | -1.443 | Destabilizing | 1.0 | D | 0.671 | prob.neutral | None | None | None | None | N |
E/P | 0.9929 | likely_pathogenic | 0.9958 | pathogenic | -0.286 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
E/Q | 0.3356 | likely_benign | 0.4354 | ambiguous | -1.278 | Destabilizing | 1.0 | D | 0.626 | neutral | N | 0.35330971 | None | None | N |
E/R | 0.7126 | likely_pathogenic | 0.8227 | pathogenic | -0.827 | Destabilizing | 1.0 | D | 0.67 | prob.neutral | None | None | None | None | N |
E/S | 0.6498 | likely_pathogenic | 0.7371 | pathogenic | -1.879 | Destabilizing | 0.999 | D | 0.691 | prob.delet. | None | None | None | None | N |
E/T | 0.6219 | likely_pathogenic | 0.7114 | pathogenic | -1.546 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
E/V | 0.5214 | ambiguous | 0.6272 | pathogenic | -0.286 | Destabilizing | 1.0 | D | 0.797 | deleterious | N | 0.323193806 | None | None | N |
E/W | 0.9915 | likely_pathogenic | 0.9947 | pathogenic | -0.426 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
E/Y | 0.9381 | likely_pathogenic | 0.9603 | pathogenic | -0.355 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.