Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13805 | 41638;41639;41640 | chr2:178636158;178636157;178636156 | chr2:179500885;179500884;179500883 |
N2AB | 12164 | 36715;36716;36717 | chr2:178636158;178636157;178636156 | chr2:179500885;179500884;179500883 |
N2A | 11237 | 33934;33935;33936 | chr2:178636158;178636157;178636156 | chr2:179500885;179500884;179500883 |
N2B | 4740 | 14443;14444;14445 | chr2:178636158;178636157;178636156 | chr2:179500885;179500884;179500883 |
Novex-1 | 4865 | 14818;14819;14820 | chr2:178636158;178636157;178636156 | chr2:179500885;179500884;179500883 |
Novex-2 | 4932 | 15019;15020;15021 | chr2:178636158;178636157;178636156 | chr2:179500885;179500884;179500883 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs753262730 | -0.071 | 0.961 | N | 0.488 | 0.139 | 0.0846915920261 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
N/K | rs753262730 | -0.071 | 0.961 | N | 0.488 | 0.139 | 0.0846915920261 | gnomAD-4.0.0 | 1.5932E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86102E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.8535 | likely_pathogenic | 0.8724 | pathogenic | -0.374 | Destabilizing | 0.871 | D | 0.552 | neutral | None | None | None | None | N |
N/C | 0.8753 | likely_pathogenic | 0.8816 | pathogenic | 0.158 | Stabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
N/D | 0.5526 | ambiguous | 0.6123 | pathogenic | 0.302 | Stabilizing | 0.961 | D | 0.475 | neutral | N | 0.345736523 | None | None | N |
N/E | 0.9468 | likely_pathogenic | 0.9598 | pathogenic | 0.335 | Stabilizing | 0.97 | D | 0.441 | neutral | None | None | None | None | N |
N/F | 0.9754 | likely_pathogenic | 0.9763 | pathogenic | -0.423 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
N/G | 0.8252 | likely_pathogenic | 0.8506 | pathogenic | -0.629 | Destabilizing | 0.931 | D | 0.469 | neutral | None | None | None | None | N |
N/H | 0.7056 | likely_pathogenic | 0.7175 | pathogenic | -0.414 | Destabilizing | 0.998 | D | 0.553 | neutral | N | 0.318029298 | None | None | N |
N/I | 0.8874 | likely_pathogenic | 0.8983 | pathogenic | 0.228 | Stabilizing | 0.989 | D | 0.769 | deleterious | N | 0.333564531 | None | None | N |
N/K | 0.9827 | likely_pathogenic | 0.9866 | pathogenic | 0.065 | Stabilizing | 0.961 | D | 0.488 | neutral | N | 0.342422716 | None | None | N |
N/L | 0.8515 | likely_pathogenic | 0.8532 | pathogenic | 0.228 | Stabilizing | 0.97 | D | 0.593 | neutral | None | None | None | None | N |
N/M | 0.9091 | likely_pathogenic | 0.9157 | pathogenic | 0.304 | Stabilizing | 1.0 | D | 0.722 | deleterious | None | None | None | None | N |
N/P | 0.9729 | likely_pathogenic | 0.9722 | pathogenic | 0.057 | Stabilizing | 0.996 | D | 0.7 | prob.delet. | None | None | None | None | N |
N/Q | 0.9441 | likely_pathogenic | 0.9488 | pathogenic | -0.395 | Destabilizing | 0.996 | D | 0.511 | neutral | None | None | None | None | N |
N/R | 0.9728 | likely_pathogenic | 0.9766 | pathogenic | 0.059 | Stabilizing | 0.996 | D | 0.502 | neutral | None | None | None | None | N |
N/S | 0.1334 | likely_benign | 0.1473 | benign | -0.384 | Destabilizing | 0.287 | N | 0.269 | neutral | N | 0.316899383 | None | None | N |
N/T | 0.4489 | ambiguous | 0.5023 | ambiguous | -0.177 | Destabilizing | 0.248 | N | 0.334 | neutral | N | 0.346334403 | None | None | N |
N/V | 0.8683 | likely_pathogenic | 0.8842 | pathogenic | 0.057 | Stabilizing | 0.991 | D | 0.593 | neutral | None | None | None | None | N |
N/W | 0.989 | likely_pathogenic | 0.9881 | pathogenic | -0.323 | Destabilizing | 1.0 | D | 0.721 | deleterious | None | None | None | None | N |
N/Y | 0.8089 | likely_pathogenic | 0.803 | pathogenic | -0.067 | Destabilizing | 0.998 | D | 0.747 | deleterious | N | 0.334720111 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.