Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13806 | 41641;41642;41643 | chr2:178636155;178636154;178636153 | chr2:179500882;179500881;179500880 |
N2AB | 12165 | 36718;36719;36720 | chr2:178636155;178636154;178636153 | chr2:179500882;179500881;179500880 |
N2A | 11238 | 33937;33938;33939 | chr2:178636155;178636154;178636153 | chr2:179500882;179500881;179500880 |
N2B | 4741 | 14446;14447;14448 | chr2:178636155;178636154;178636153 | chr2:179500882;179500881;179500880 |
Novex-1 | 4866 | 14821;14822;14823 | chr2:178636155;178636154;178636153 | chr2:179500882;179500881;179500880 |
Novex-2 | 4933 | 15022;15023;15024 | chr2:178636155;178636154;178636153 | chr2:179500882;179500881;179500880 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs767727056 | 0.027 | 1.0 | N | 0.803 | 0.18 | 0.117506650769 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
K/N | rs767727056 | 0.027 | 1.0 | N | 0.803 | 0.18 | 0.117506650769 | gnomAD-4.0.0 | 1.59306E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86079E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8838 | likely_pathogenic | 0.8602 | pathogenic | 0.008 | Stabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | N |
K/C | 0.9635 | likely_pathogenic | 0.9541 | pathogenic | -0.396 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
K/D | 0.9771 | likely_pathogenic | 0.9713 | pathogenic | -0.018 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
K/E | 0.6677 | likely_pathogenic | 0.6468 | pathogenic | 0.035 | Stabilizing | 0.999 | D | 0.697 | prob.delet. | N | 0.319113964 | None | None | N |
K/F | 0.9871 | likely_pathogenic | 0.9836 | pathogenic | -0.011 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
K/G | 0.921 | likely_pathogenic | 0.9051 | pathogenic | -0.238 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | N |
K/H | 0.8317 | likely_pathogenic | 0.786 | pathogenic | -0.378 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
K/I | 0.8777 | likely_pathogenic | 0.868 | pathogenic | 0.593 | Stabilizing | 1.0 | D | 0.754 | deleterious | N | 0.357388891 | None | None | N |
K/L | 0.8582 | likely_pathogenic | 0.8373 | pathogenic | 0.593 | Stabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | N |
K/M | 0.7607 | likely_pathogenic | 0.7281 | pathogenic | 0.081 | Stabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
K/N | 0.9515 | likely_pathogenic | 0.9404 | pathogenic | -0.072 | Destabilizing | 1.0 | D | 0.803 | deleterious | N | 0.318799794 | None | None | N |
K/P | 0.9872 | likely_pathogenic | 0.9878 | pathogenic | 0.427 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/Q | 0.4759 | ambiguous | 0.4071 | ambiguous | -0.12 | Destabilizing | 1.0 | D | 0.819 | deleterious | N | 0.326004407 | None | None | N |
K/R | 0.1396 | likely_benign | 0.1204 | benign | -0.154 | Destabilizing | 0.999 | D | 0.623 | neutral | N | 0.341042165 | None | None | N |
K/S | 0.9366 | likely_pathogenic | 0.9195 | pathogenic | -0.506 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
K/T | 0.7435 | likely_pathogenic | 0.7041 | pathogenic | -0.288 | Destabilizing | 1.0 | D | 0.738 | deleterious | N | 0.330288049 | None | None | N |
K/V | 0.8332 | likely_pathogenic | 0.8101 | pathogenic | 0.427 | Stabilizing | 1.0 | D | 0.691 | prob.delet. | None | None | None | None | N |
K/W | 0.9788 | likely_pathogenic | 0.9715 | pathogenic | -0.069 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
K/Y | 0.9588 | likely_pathogenic | 0.9445 | pathogenic | 0.272 | Stabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.