Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13823 | 41692;41693;41694 | chr2:178636104;178636103;178636102 | chr2:179500831;179500830;179500829 |
N2AB | 12182 | 36769;36770;36771 | chr2:178636104;178636103;178636102 | chr2:179500831;179500830;179500829 |
N2A | 11255 | 33988;33989;33990 | chr2:178636104;178636103;178636102 | chr2:179500831;179500830;179500829 |
N2B | 4758 | 14497;14498;14499 | chr2:178636104;178636103;178636102 | chr2:179500831;179500830;179500829 |
Novex-1 | 4883 | 14872;14873;14874 | chr2:178636104;178636103;178636102 | chr2:179500831;179500830;179500829 |
Novex-2 | 4950 | 15073;15074;15075 | chr2:178636104;178636103;178636102 | chr2:179500831;179500830;179500829 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | rs2060403983 | None | 0.627 | N | 0.451 | 0.226 | 0.273503213844 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.067 | likely_benign | 0.1007 | benign | -0.354 | Destabilizing | None | N | 0.103 | neutral | N | 0.352125352 | None | None | N |
P/C | 0.6339 | likely_pathogenic | 0.8186 | pathogenic | -0.743 | Destabilizing | 0.944 | D | 0.378 | neutral | None | None | None | None | N |
P/D | 0.3722 | ambiguous | 0.569 | pathogenic | -0.453 | Destabilizing | 0.002 | N | 0.188 | neutral | None | None | None | None | N |
P/E | 0.2198 | likely_benign | 0.3633 | ambiguous | -0.572 | Destabilizing | 0.241 | N | 0.349 | neutral | None | None | None | None | N |
P/F | 0.6012 | likely_pathogenic | 0.8239 | pathogenic | -0.679 | Destabilizing | 0.818 | D | 0.427 | neutral | None | None | None | None | N |
P/G | 0.3187 | likely_benign | 0.5092 | ambiguous | -0.44 | Destabilizing | 0.116 | N | 0.334 | neutral | None | None | None | None | N |
P/H | 0.2307 | likely_benign | 0.378 | ambiguous | -0.021 | Destabilizing | 0.975 | D | 0.318 | neutral | N | 0.331228996 | None | None | N |
P/I | 0.3425 | ambiguous | 0.5335 | ambiguous | -0.278 | Destabilizing | 0.69 | D | 0.545 | neutral | None | None | None | None | N |
P/K | 0.2575 | likely_benign | 0.4405 | ambiguous | -0.462 | Destabilizing | 0.388 | N | 0.353 | neutral | None | None | None | None | N |
P/L | 0.144 | likely_benign | 0.2358 | benign | -0.278 | Destabilizing | 0.193 | N | 0.449 | neutral | N | 0.339829317 | None | None | N |
P/M | 0.3417 | ambiguous | 0.5132 | ambiguous | -0.489 | Destabilizing | 0.944 | D | 0.317 | neutral | None | None | None | None | N |
P/N | 0.3061 | likely_benign | 0.4993 | ambiguous | -0.248 | Destabilizing | 0.388 | N | 0.452 | neutral | None | None | None | None | N |
P/Q | 0.1511 | likely_benign | 0.258 | benign | -0.484 | Destabilizing | 0.818 | D | 0.428 | neutral | None | None | None | None | N |
P/R | 0.1972 | likely_benign | 0.33 | benign | 0.044 | Stabilizing | 0.627 | D | 0.451 | neutral | N | 0.319740092 | None | None | N |
P/S | 0.1268 | likely_benign | 0.2222 | benign | -0.542 | Destabilizing | 0.006 | N | 0.205 | neutral | N | 0.347821801 | None | None | N |
P/T | 0.1031 | likely_benign | 0.1742 | benign | -0.568 | Destabilizing | 0.193 | N | 0.349 | neutral | N | 0.342470837 | None | None | N |
P/V | 0.2367 | likely_benign | 0.3729 | ambiguous | -0.272 | Destabilizing | 0.241 | N | 0.386 | neutral | None | None | None | None | N |
P/W | 0.7395 | likely_pathogenic | 0.9013 | pathogenic | -0.753 | Destabilizing | 0.981 | D | 0.468 | neutral | None | None | None | None | N |
P/Y | 0.5296 | ambiguous | 0.7488 | pathogenic | -0.468 | Destabilizing | 0.932 | D | 0.421 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.