Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13828 | 41707;41708;41709 | chr2:178636089;178636088;178636087 | chr2:179500816;179500815;179500814 |
N2AB | 12187 | 36784;36785;36786 | chr2:178636089;178636088;178636087 | chr2:179500816;179500815;179500814 |
N2A | 11260 | 34003;34004;34005 | chr2:178636089;178636088;178636087 | chr2:179500816;179500815;179500814 |
N2B | 4763 | 14512;14513;14514 | chr2:178636089;178636088;178636087 | chr2:179500816;179500815;179500814 |
Novex-1 | 4888 | 14887;14888;14889 | chr2:178636089;178636088;178636087 | chr2:179500816;179500815;179500814 |
Novex-2 | 4955 | 15088;15089;15090 | chr2:178636089;178636088;178636087 | chr2:179500816;179500815;179500814 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs748565404 | -1.502 | 0.784 | N | 0.45 | 0.163 | 0.15556083564 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/S | rs748565404 | -1.502 | 0.784 | N | 0.45 | 0.163 | 0.15556083564 | gnomAD-4.0.0 | 6.58137E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47132E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1752 | likely_benign | 0.1742 | benign | -1.08 | Destabilizing | 0.244 | N | 0.329 | neutral | N | 0.347872504 | None | None | I |
P/C | 0.8204 | likely_pathogenic | 0.8088 | pathogenic | -0.896 | Destabilizing | 0.981 | D | 0.505 | neutral | None | None | None | None | I |
P/D | 0.8638 | likely_pathogenic | 0.8697 | pathogenic | -0.721 | Destabilizing | 0.936 | D | 0.491 | neutral | None | None | None | None | I |
P/E | 0.6577 | likely_pathogenic | 0.6661 | pathogenic | -0.737 | Destabilizing | 0.936 | D | 0.465 | neutral | None | None | None | None | I |
P/F | 0.8536 | likely_pathogenic | 0.866 | pathogenic | -0.833 | Destabilizing | 0.704 | D | 0.547 | neutral | None | None | None | None | I |
P/G | 0.679 | likely_pathogenic | 0.6777 | pathogenic | -1.359 | Destabilizing | 0.936 | D | 0.498 | neutral | None | None | None | None | I |
P/H | 0.4956 | ambiguous | 0.4832 | ambiguous | -0.829 | Destabilizing | 0.995 | D | 0.477 | neutral | None | None | None | None | I |
P/I | 0.6659 | likely_pathogenic | 0.6751 | pathogenic | -0.438 | Destabilizing | 0.001 | N | 0.251 | neutral | None | None | None | None | I |
P/K | 0.6876 | likely_pathogenic | 0.6827 | pathogenic | -0.969 | Destabilizing | 0.828 | D | 0.461 | neutral | None | None | None | None | I |
P/L | 0.2815 | likely_benign | 0.2809 | benign | -0.438 | Destabilizing | 0.002 | N | 0.284 | neutral | N | 0.287582016 | None | None | I |
P/M | 0.6647 | likely_pathogenic | 0.6627 | pathogenic | -0.493 | Destabilizing | 0.893 | D | 0.535 | neutral | None | None | None | None | I |
P/N | 0.7617 | likely_pathogenic | 0.767 | pathogenic | -0.78 | Destabilizing | 0.981 | D | 0.556 | neutral | None | None | None | None | I |
P/Q | 0.4416 | ambiguous | 0.4373 | ambiguous | -0.917 | Destabilizing | 0.975 | D | 0.452 | neutral | N | 0.34040111 | None | None | I |
P/R | 0.4822 | ambiguous | 0.4678 | ambiguous | -0.487 | Destabilizing | 0.927 | D | 0.555 | neutral | N | 0.337215383 | None | None | I |
P/S | 0.3466 | ambiguous | 0.3432 | ambiguous | -1.273 | Destabilizing | 0.784 | D | 0.45 | neutral | N | 0.335707796 | None | None | I |
P/T | 0.2605 | likely_benign | 0.2601 | benign | -1.169 | Destabilizing | 0.425 | N | 0.344 | neutral | N | 0.339848476 | None | None | I |
P/V | 0.5072 | ambiguous | 0.508 | ambiguous | -0.616 | Destabilizing | 0.013 | N | 0.229 | neutral | None | None | None | None | I |
P/W | 0.9133 | likely_pathogenic | 0.9167 | pathogenic | -0.983 | Destabilizing | 0.995 | D | 0.595 | neutral | None | None | None | None | I |
P/Y | 0.8262 | likely_pathogenic | 0.8345 | pathogenic | -0.688 | Destabilizing | 0.944 | D | 0.571 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.