Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13837 | 41734;41735;41736 | chr2:178636062;178636061;178636060 | chr2:179500789;179500788;179500787 |
N2AB | 12196 | 36811;36812;36813 | chr2:178636062;178636061;178636060 | chr2:179500789;179500788;179500787 |
N2A | 11269 | 34030;34031;34032 | chr2:178636062;178636061;178636060 | chr2:179500789;179500788;179500787 |
N2B | 4772 | 14539;14540;14541 | chr2:178636062;178636061;178636060 | chr2:179500789;179500788;179500787 |
Novex-1 | 4897 | 14914;14915;14916 | chr2:178636062;178636061;178636060 | chr2:179500789;179500788;179500787 |
Novex-2 | 4964 | 15115;15116;15117 | chr2:178636062;178636061;178636060 | chr2:179500789;179500788;179500787 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.022 | N | 0.284 | 0.115 | 0.276482976112 | gnomAD-4.0.0 | 6.84402E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65695E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9703 | likely_pathogenic | 0.976 | pathogenic | -2.261 | Highly Destabilizing | 0.067 | N | 0.581 | neutral | None | None | None | None | N |
L/C | 0.9662 | likely_pathogenic | 0.9718 | pathogenic | -1.616 | Destabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | N |
L/D | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -2.977 | Highly Destabilizing | 0.974 | D | 0.889 | deleterious | None | None | None | None | N |
L/E | 0.9976 | likely_pathogenic | 0.9977 | pathogenic | -2.676 | Highly Destabilizing | 0.974 | D | 0.87 | deleterious | None | None | None | None | N |
L/F | 0.7185 | likely_pathogenic | 0.8017 | pathogenic | -1.376 | Destabilizing | 0.949 | D | 0.749 | deleterious | None | None | None | None | N |
L/G | 0.997 | likely_pathogenic | 0.997 | pathogenic | -2.85 | Highly Destabilizing | 0.904 | D | 0.829 | deleterious | None | None | None | None | N |
L/H | 0.9954 | likely_pathogenic | 0.9959 | pathogenic | -2.553 | Highly Destabilizing | 0.998 | D | 0.86 | deleterious | None | None | None | None | N |
L/I | 0.2943 | likely_benign | 0.3546 | ambiguous | -0.522 | Destabilizing | 0.007 | N | 0.276 | neutral | None | None | None | None | N |
L/K | 0.9954 | likely_pathogenic | 0.9954 | pathogenic | -1.832 | Destabilizing | 0.949 | D | 0.838 | deleterious | None | None | None | None | N |
L/M | 0.3892 | ambiguous | 0.4387 | ambiguous | -0.611 | Destabilizing | 0.934 | D | 0.669 | prob.neutral | N | 0.492442361 | None | None | N |
L/N | 0.9981 | likely_pathogenic | 0.9979 | pathogenic | -2.458 | Highly Destabilizing | 0.991 | D | 0.887 | deleterious | None | None | None | None | N |
L/P | 0.9988 | likely_pathogenic | 0.9986 | pathogenic | -1.088 | Destabilizing | 0.966 | D | 0.891 | deleterious | D | 0.556985657 | None | None | N |
L/Q | 0.9911 | likely_pathogenic | 0.9914 | pathogenic | -2.148 | Highly Destabilizing | 0.989 | D | 0.86 | deleterious | D | 0.556985657 | None | None | N |
L/R | 0.9918 | likely_pathogenic | 0.9921 | pathogenic | -1.881 | Destabilizing | 0.966 | D | 0.883 | deleterious | D | 0.556985657 | None | None | N |
L/S | 0.9966 | likely_pathogenic | 0.9972 | pathogenic | -3.054 | Highly Destabilizing | 0.728 | D | 0.815 | deleterious | None | None | None | None | N |
L/T | 0.9869 | likely_pathogenic | 0.9887 | pathogenic | -2.583 | Highly Destabilizing | 0.842 | D | 0.831 | deleterious | None | None | None | None | N |
L/V | 0.3499 | ambiguous | 0.4333 | ambiguous | -1.088 | Destabilizing | 0.022 | N | 0.284 | neutral | N | 0.388709253 | None | None | N |
L/W | 0.9773 | likely_pathogenic | 0.985 | pathogenic | -1.812 | Destabilizing | 0.998 | D | 0.83 | deleterious | None | None | None | None | N |
L/Y | 0.9823 | likely_pathogenic | 0.9868 | pathogenic | -1.47 | Destabilizing | 0.991 | D | 0.851 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.