Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13845 | 41758;41759;41760 | chr2:178636038;178636037;178636036 | chr2:179500765;179500764;179500763 |
N2AB | 12204 | 36835;36836;36837 | chr2:178636038;178636037;178636036 | chr2:179500765;179500764;179500763 |
N2A | 11277 | 34054;34055;34056 | chr2:178636038;178636037;178636036 | chr2:179500765;179500764;179500763 |
N2B | 4780 | 14563;14564;14565 | chr2:178636038;178636037;178636036 | chr2:179500765;179500764;179500763 |
Novex-1 | 4905 | 14938;14939;14940 | chr2:178636038;178636037;178636036 | chr2:179500765;179500764;179500763 |
Novex-2 | 4972 | 15139;15140;15141 | chr2:178636038;178636037;178636036 | chr2:179500765;179500764;179500763 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/R | None | None | 0.017 | N | 0.443 | 0.055 | 0.0551355673512 | gnomAD-4.0.0 | 1.36887E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52372E-05 | None | 0 | 0 | 8.99708E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0611 | likely_benign | 0.0619 | benign | -0.278 | Destabilizing | None | N | 0.065 | neutral | N | 0.341127784 | None | None | N |
T/C | 0.2607 | likely_benign | 0.2969 | benign | -0.011 | Destabilizing | 0.245 | N | 0.282 | neutral | None | None | None | None | N |
T/D | 0.1771 | likely_benign | 0.2206 | benign | -0.114 | Destabilizing | None | N | 0.105 | neutral | None | None | None | None | N |
T/E | 0.1772 | likely_benign | 0.2351 | benign | -0.215 | Destabilizing | None | N | 0.095 | neutral | None | None | None | None | N |
T/F | 0.091 | likely_benign | 0.0963 | benign | -0.945 | Destabilizing | None | N | 0.109 | neutral | None | None | None | None | N |
T/G | 0.1395 | likely_benign | 0.1383 | benign | -0.347 | Destabilizing | 0.004 | N | 0.323 | neutral | None | None | None | None | N |
T/H | 0.1239 | likely_benign | 0.1559 | benign | -0.692 | Destabilizing | None | N | 0.236 | neutral | None | None | None | None | N |
T/I | 0.1424 | likely_benign | 0.1878 | benign | -0.214 | Destabilizing | 0.017 | N | 0.463 | neutral | N | 0.324578565 | None | None | N |
T/K | 0.1469 | likely_benign | 0.2023 | benign | -0.175 | Destabilizing | 0.007 | N | 0.313 | neutral | N | 0.347343612 | None | None | N |
T/L | 0.0895 | likely_benign | 0.1043 | benign | -0.214 | Destabilizing | 0.004 | N | 0.32 | neutral | None | None | None | None | N |
T/M | 0.0821 | likely_benign | 0.0906 | benign | 0.145 | Stabilizing | 0.245 | N | 0.277 | neutral | None | None | None | None | N |
T/N | 0.0776 | likely_benign | 0.0841 | benign | 0.111 | Stabilizing | 0.009 | N | 0.301 | neutral | None | None | None | None | N |
T/P | 0.3313 | likely_benign | 0.3874 | ambiguous | -0.211 | Destabilizing | None | N | 0.206 | neutral | N | 0.345540368 | None | None | N |
T/Q | 0.1514 | likely_benign | 0.1881 | benign | -0.198 | Destabilizing | None | N | 0.229 | neutral | None | None | None | None | N |
T/R | 0.1199 | likely_benign | 0.1677 | benign | 0.126 | Stabilizing | 0.017 | N | 0.443 | neutral | N | 0.344184609 | None | None | N |
T/S | 0.0714 | likely_benign | 0.0689 | benign | -0.04 | Destabilizing | None | N | 0.04 | neutral | N | 0.331911924 | None | None | N |
T/V | 0.1199 | likely_benign | 0.1418 | benign | -0.211 | Destabilizing | 0.009 | N | 0.18 | neutral | None | None | None | None | N |
T/W | 0.3412 | ambiguous | 0.3699 | ambiguous | -0.981 | Destabilizing | None | N | 0.211 | neutral | None | None | None | None | N |
T/Y | 0.1328 | likely_benign | 0.1309 | benign | -0.675 | Destabilizing | None | N | 0.229 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.