Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13849 | 41770;41771;41772 | chr2:178636026;178636025;178636024 | chr2:179500753;179500752;179500751 |
N2AB | 12208 | 36847;36848;36849 | chr2:178636026;178636025;178636024 | chr2:179500753;179500752;179500751 |
N2A | 11281 | 34066;34067;34068 | chr2:178636026;178636025;178636024 | chr2:179500753;179500752;179500751 |
N2B | 4784 | 14575;14576;14577 | chr2:178636026;178636025;178636024 | chr2:179500753;179500752;179500751 |
Novex-1 | 4909 | 14950;14951;14952 | chr2:178636026;178636025;178636024 | chr2:179500753;179500752;179500751 |
Novex-2 | 4976 | 15151;15152;15153 | chr2:178636026;178636025;178636024 | chr2:179500753;179500752;179500751 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs759603723 | -0.063 | 0.27 | N | 0.421 | 0.068 | 0.176091768786 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs759603723 | -0.063 | 0.27 | N | 0.421 | 0.068 | 0.176091768786 | gnomAD-4.0.0 | 1.59286E-06 | None | None | None | None | N | None | 0 | 2.28728E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1532 | likely_benign | 0.1547 | benign | -1.059 | Destabilizing | 0.01 | N | 0.186 | neutral | N | 0.353146622 | None | None | N |
T/C | 0.5122 | ambiguous | 0.52 | ambiguous | -0.633 | Destabilizing | 0.995 | D | 0.453 | neutral | None | None | None | None | N |
T/D | 0.536 | ambiguous | 0.5776 | pathogenic | -0.487 | Destabilizing | 0.543 | D | 0.536 | neutral | None | None | None | None | N |
T/E | 0.4337 | ambiguous | 0.4785 | ambiguous | -0.503 | Destabilizing | 0.007 | N | 0.318 | neutral | None | None | None | None | N |
T/F | 0.3333 | likely_benign | 0.3695 | ambiguous | -1.367 | Destabilizing | 0.893 | D | 0.569 | neutral | None | None | None | None | N |
T/G | 0.5527 | ambiguous | 0.558 | ambiguous | -1.274 | Destabilizing | 0.704 | D | 0.471 | neutral | None | None | None | None | N |
T/H | 0.3433 | ambiguous | 0.3681 | ambiguous | -1.625 | Destabilizing | 0.944 | D | 0.535 | neutral | None | None | None | None | N |
T/I | 0.1433 | likely_benign | 0.1601 | benign | -0.578 | Destabilizing | 0.27 | N | 0.421 | neutral | N | 0.344972003 | None | None | N |
T/K | 0.2701 | likely_benign | 0.2904 | benign | -0.739 | Destabilizing | 0.473 | N | 0.541 | neutral | N | 0.345530237 | None | None | N |
T/L | 0.1237 | likely_benign | 0.1319 | benign | -0.578 | Destabilizing | 0.007 | N | 0.3 | neutral | None | None | None | None | N |
T/M | 0.1104 | likely_benign | 0.1146 | benign | -0.048 | Destabilizing | 0.893 | D | 0.473 | neutral | None | None | None | None | N |
T/N | 0.1431 | likely_benign | 0.1475 | benign | -0.69 | Destabilizing | 0.704 | D | 0.476 | neutral | None | None | None | None | N |
T/P | 0.4157 | ambiguous | 0.3616 | ambiguous | -0.709 | Destabilizing | 0.927 | D | 0.555 | neutral | N | 0.370169183 | None | None | N |
T/Q | 0.3132 | likely_benign | 0.3286 | benign | -0.963 | Destabilizing | 0.807 | D | 0.538 | neutral | None | None | None | None | N |
T/R | 0.2286 | likely_benign | 0.254 | benign | -0.448 | Destabilizing | 0.863 | D | 0.551 | neutral | N | 0.353140419 | None | None | N |
T/S | 0.1967 | likely_benign | 0.2078 | benign | -0.977 | Destabilizing | 0.065 | N | 0.23 | neutral | N | 0.348731656 | None | None | N |
T/V | 0.1321 | likely_benign | 0.1458 | benign | -0.709 | Destabilizing | 0.003 | N | 0.186 | neutral | None | None | None | None | N |
T/W | 0.7393 | likely_pathogenic | 0.7644 | pathogenic | -1.249 | Destabilizing | 0.995 | D | 0.608 | neutral | None | None | None | None | N |
T/Y | 0.3643 | ambiguous | 0.3781 | ambiguous | -1.01 | Destabilizing | 0.981 | D | 0.562 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.