Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13856 | 41791;41792;41793 | chr2:178636005;178636004;178636003 | chr2:179500732;179500731;179500730 |
N2AB | 12215 | 36868;36869;36870 | chr2:178636005;178636004;178636003 | chr2:179500732;179500731;179500730 |
N2A | 11288 | 34087;34088;34089 | chr2:178636005;178636004;178636003 | chr2:179500732;179500731;179500730 |
N2B | 4791 | 14596;14597;14598 | chr2:178636005;178636004;178636003 | chr2:179500732;179500731;179500730 |
Novex-1 | 4916 | 14971;14972;14973 | chr2:178636005;178636004;178636003 | chr2:179500732;179500731;179500730 |
Novex-2 | 4983 | 15172;15173;15174 | chr2:178636005;178636004;178636003 | chr2:179500732;179500731;179500730 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs559906667 | None | 0.82 | N | 0.254 | 0.267 | 0.0138822411134 | gnomAD-4.0.0 | 2.743E-06 | None | None | None | None | N | None | 8.9858E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16339E-05 | 0 |
N/S | rs369638798 | -0.449 | 0.023 | N | 0.179 | 0.146 | None | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
N/S | rs369638798 | -0.449 | 0.023 | N | 0.179 | 0.146 | None | gnomAD-4.0.0 | 1.59917E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87606E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.6785 | likely_pathogenic | 0.6508 | pathogenic | -0.046 | Destabilizing | 0.329 | N | 0.391 | neutral | None | None | None | None | N |
N/C | 0.8365 | likely_pathogenic | 0.8127 | pathogenic | 0.04 | Stabilizing | 0.995 | D | 0.479 | neutral | None | None | None | None | N |
N/D | 0.2888 | likely_benign | 0.2909 | benign | -0.012 | Destabilizing | 0.001 | N | 0.045 | neutral | N | 0.371843967 | None | None | N |
N/E | 0.7674 | likely_pathogenic | 0.7563 | pathogenic | -0.08 | Destabilizing | 0.329 | N | 0.285 | neutral | None | None | None | None | N |
N/F | 0.9029 | likely_pathogenic | 0.8932 | pathogenic | -0.7 | Destabilizing | 0.944 | D | 0.604 | neutral | None | None | None | None | N |
N/G | 0.5512 | ambiguous | 0.5164 | ambiguous | -0.111 | Destabilizing | 0.003 | N | 0.09 | neutral | None | None | None | None | N |
N/H | 0.4045 | ambiguous | 0.369 | ambiguous | -0.132 | Destabilizing | 0.013 | N | 0.17 | neutral | N | 0.446551169 | None | None | N |
N/I | 0.7889 | likely_pathogenic | 0.7663 | pathogenic | 0.026 | Stabilizing | 0.927 | D | 0.625 | neutral | N | 0.445346255 | None | None | N |
N/K | 0.7509 | likely_pathogenic | 0.7358 | pathogenic | 0.04 | Stabilizing | 0.82 | D | 0.254 | neutral | N | 0.409563114 | None | None | N |
N/L | 0.7623 | likely_pathogenic | 0.7293 | pathogenic | 0.026 | Stabilizing | 0.704 | D | 0.571 | neutral | None | None | None | None | N |
N/M | 0.7586 | likely_pathogenic | 0.7236 | pathogenic | 0.003 | Stabilizing | 0.995 | D | 0.445 | neutral | None | None | None | None | N |
N/P | 0.9602 | likely_pathogenic | 0.9526 | pathogenic | 0.023 | Stabilizing | 0.944 | D | 0.597 | neutral | None | None | None | None | N |
N/Q | 0.7925 | likely_pathogenic | 0.765 | pathogenic | -0.269 | Destabilizing | 0.828 | D | 0.325 | neutral | None | None | None | None | N |
N/R | 0.8221 | likely_pathogenic | 0.809 | pathogenic | 0.11 | Stabilizing | 0.704 | D | 0.335 | neutral | None | None | None | None | N |
N/S | 0.2866 | likely_benign | 0.2713 | benign | -0.056 | Destabilizing | 0.023 | N | 0.179 | neutral | N | 0.363665098 | None | None | N |
N/T | 0.4637 | ambiguous | 0.4295 | ambiguous | -0.027 | Destabilizing | 0.473 | N | 0.237 | neutral | N | 0.339543464 | None | None | N |
N/V | 0.7812 | likely_pathogenic | 0.7477 | pathogenic | 0.023 | Stabilizing | 0.704 | D | 0.604 | neutral | None | None | None | None | N |
N/W | 0.9672 | likely_pathogenic | 0.9632 | pathogenic | -0.874 | Destabilizing | 0.995 | D | 0.553 | neutral | None | None | None | None | N |
N/Y | 0.532 | ambiguous | 0.4946 | ambiguous | -0.536 | Destabilizing | 0.863 | D | 0.579 | neutral | N | 0.446551169 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.