Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13859 | 41800;41801;41802 | chr2:178635996;178635995;178635994 | chr2:179500723;179500722;179500721 |
N2AB | 12218 | 36877;36878;36879 | chr2:178635996;178635995;178635994 | chr2:179500723;179500722;179500721 |
N2A | 11291 | 34096;34097;34098 | chr2:178635996;178635995;178635994 | chr2:179500723;179500722;179500721 |
N2B | 4794 | 14605;14606;14607 | chr2:178635996;178635995;178635994 | chr2:179500723;179500722;179500721 |
Novex-1 | 4919 | 14980;14981;14982 | chr2:178635996;178635995;178635994 | chr2:179500723;179500722;179500721 |
Novex-2 | 4986 | 15181;15182;15183 | chr2:178635996;178635995;178635994 | chr2:179500723;179500722;179500721 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.818 | N | 0.205 | 0.134 | 0.0401082797425 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4165 | ambiguous | 0.379 | ambiguous | -0.068 | Destabilizing | 0.71 | D | 0.319 | neutral | None | None | None | None | N |
N/C | 0.5228 | ambiguous | 0.4684 | ambiguous | 0.122 | Stabilizing | 0.998 | D | 0.43 | neutral | None | None | None | None | N |
N/D | 0.1589 | likely_benign | 0.1531 | benign | -0.018 | Destabilizing | 0.79 | D | 0.315 | neutral | N | 0.331141431 | None | None | N |
N/E | 0.5902 | likely_pathogenic | 0.5603 | ambiguous | -0.086 | Destabilizing | 0.71 | D | 0.217 | neutral | None | None | None | None | N |
N/F | 0.7413 | likely_pathogenic | 0.7227 | pathogenic | -0.69 | Destabilizing | 0.977 | D | 0.596 | neutral | None | None | None | None | N |
N/G | 0.3381 | likely_benign | 0.3024 | benign | -0.142 | Destabilizing | 0.833 | D | 0.23 | neutral | None | None | None | None | N |
N/H | 0.161 | likely_benign | 0.1462 | benign | -0.171 | Destabilizing | 0.014 | N | 0.179 | neutral | N | 0.339974608 | None | None | N |
N/I | 0.5442 | ambiguous | 0.4963 | ambiguous | 0.028 | Stabilizing | 0.94 | D | 0.579 | neutral | N | 0.339450014 | None | None | N |
N/K | 0.4985 | ambiguous | 0.4574 | ambiguous | 0.031 | Stabilizing | 0.818 | D | 0.205 | neutral | N | 0.320099173 | None | None | N |
N/L | 0.4595 | ambiguous | 0.4095 | ambiguous | 0.028 | Stabilizing | 0.856 | D | 0.417 | neutral | None | None | None | None | N |
N/M | 0.6254 | likely_pathogenic | 0.5746 | pathogenic | 0.043 | Stabilizing | 0.992 | D | 0.39 | neutral | None | None | None | None | N |
N/P | 0.8441 | likely_pathogenic | 0.799 | pathogenic | 0.017 | Stabilizing | 0.992 | D | 0.515 | neutral | None | None | None | None | N |
N/Q | 0.4874 | ambiguous | 0.4435 | ambiguous | -0.212 | Destabilizing | 0.923 | D | 0.287 | neutral | None | None | None | None | N |
N/R | 0.5098 | ambiguous | 0.4776 | ambiguous | 0.11 | Stabilizing | 0.923 | D | 0.195 | neutral | None | None | None | None | N |
N/S | 0.1201 | likely_benign | 0.1095 | benign | -0.002 | Destabilizing | 0.481 | N | 0.257 | neutral | N | 0.311393489 | None | None | N |
N/T | 0.2893 | likely_benign | 0.2591 | benign | 0.025 | Stabilizing | 0.008 | N | 0.045 | neutral | N | 0.271582526 | None | None | N |
N/V | 0.5346 | ambiguous | 0.4828 | ambiguous | 0.017 | Stabilizing | 0.856 | D | 0.469 | neutral | None | None | None | None | N |
N/W | 0.9232 | likely_pathogenic | 0.9089 | pathogenic | -0.854 | Destabilizing | 0.998 | D | 0.482 | neutral | None | None | None | None | N |
N/Y | 0.3119 | likely_benign | 0.2894 | benign | -0.528 | Destabilizing | 0.94 | D | 0.528 | neutral | N | 0.347496488 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.