Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13861 | 41806;41807;41808 | chr2:178635990;178635989;178635988 | chr2:179500717;179500716;179500715 |
N2AB | 12220 | 36883;36884;36885 | chr2:178635990;178635989;178635988 | chr2:179500717;179500716;179500715 |
N2A | 11293 | 34102;34103;34104 | chr2:178635990;178635989;178635988 | chr2:179500717;179500716;179500715 |
N2B | 4796 | 14611;14612;14613 | chr2:178635990;178635989;178635988 | chr2:179500717;179500716;179500715 |
Novex-1 | 4921 | 14986;14987;14988 | chr2:178635990;178635989;178635988 | chr2:179500717;179500716;179500715 |
Novex-2 | 4988 | 15187;15188;15189 | chr2:178635990;178635989;178635988 | chr2:179500717;179500716;179500715 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs1553746267 | None | 0.042 | N | 0.339 | 0.123 | 0.104622674875 | gnomAD-4.0.0 | 3.20883E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.77317E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2381 | likely_benign | 0.2347 | benign | -0.632 | Destabilizing | 0.042 | N | 0.339 | neutral | N | 0.350138294 | None | None | N |
E/C | 0.9241 | likely_pathogenic | 0.9243 | pathogenic | -0.268 | Destabilizing | 0.958 | D | 0.445 | neutral | None | None | None | None | N |
E/D | 0.5082 | ambiguous | 0.5209 | ambiguous | -0.768 | Destabilizing | None | N | 0.097 | neutral | N | 0.351323942 | None | None | N |
E/F | 0.9083 | likely_pathogenic | 0.9135 | pathogenic | -0.18 | Destabilizing | 0.858 | D | 0.551 | neutral | None | None | None | None | N |
E/G | 0.4786 | ambiguous | 0.4995 | ambiguous | -0.93 | Destabilizing | 0.042 | N | 0.309 | neutral | N | 0.34595872 | None | None | N |
E/H | 0.7184 | likely_pathogenic | 0.7108 | pathogenic | -0.164 | Destabilizing | 0.495 | N | 0.441 | neutral | None | None | None | None | N |
E/I | 0.563 | ambiguous | 0.5614 | ambiguous | 0.155 | Stabilizing | 0.665 | D | 0.593 | neutral | None | None | None | None | N |
E/K | 0.3504 | ambiguous | 0.3648 | ambiguous | -0.062 | Destabilizing | None | N | 0.071 | neutral | N | 0.345048885 | None | None | N |
E/L | 0.7026 | likely_pathogenic | 0.7077 | pathogenic | 0.155 | Stabilizing | 0.218 | N | 0.527 | neutral | None | None | None | None | N |
E/M | 0.6575 | likely_pathogenic | 0.6662 | pathogenic | 0.383 | Stabilizing | 0.665 | D | 0.447 | neutral | None | None | None | None | N |
E/N | 0.626 | likely_pathogenic | 0.6245 | pathogenic | -0.587 | Destabilizing | 0.218 | N | 0.381 | neutral | None | None | None | None | N |
E/P | 0.9544 | likely_pathogenic | 0.9407 | pathogenic | -0.086 | Destabilizing | 0.362 | N | 0.536 | neutral | None | None | None | None | N |
E/Q | 0.1594 | likely_benign | 0.1523 | benign | -0.485 | Destabilizing | 0.003 | N | 0.141 | neutral | N | 0.34409478 | None | None | N |
E/R | 0.5118 | ambiguous | 0.515 | ambiguous | 0.238 | Stabilizing | 0.123 | N | 0.379 | neutral | None | None | None | None | N |
E/S | 0.3163 | likely_benign | 0.3151 | benign | -0.781 | Destabilizing | 0.002 | N | 0.093 | neutral | None | None | None | None | N |
E/T | 0.3027 | likely_benign | 0.3038 | benign | -0.53 | Destabilizing | 0.123 | N | 0.423 | neutral | None | None | None | None | N |
E/V | 0.3255 | likely_benign | 0.3337 | benign | -0.086 | Destabilizing | 0.174 | N | 0.441 | neutral | N | 0.343267797 | None | None | N |
E/W | 0.978 | likely_pathogenic | 0.9798 | pathogenic | 0.08 | Stabilizing | 0.958 | D | 0.477 | neutral | None | None | None | None | N |
E/Y | 0.8754 | likely_pathogenic | 0.8883 | pathogenic | 0.088 | Stabilizing | 0.665 | D | 0.571 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.