Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13868 | 41827;41828;41829 | chr2:178635969;178635968;178635967 | chr2:179500696;179500695;179500694 |
N2AB | 12227 | 36904;36905;36906 | chr2:178635969;178635968;178635967 | chr2:179500696;179500695;179500694 |
N2A | 11300 | 34123;34124;34125 | chr2:178635969;178635968;178635967 | chr2:179500696;179500695;179500694 |
N2B | 4803 | 14632;14633;14634 | chr2:178635969;178635968;178635967 | chr2:179500696;179500695;179500694 |
Novex-1 | 4928 | 15007;15008;15009 | chr2:178635969;178635968;178635967 | chr2:179500696;179500695;179500694 |
Novex-2 | 4995 | 15208;15209;15210 | chr2:178635969;178635968;178635967 | chr2:179500696;179500695;179500694 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.978 | N | 0.554 | 0.373 | 0.570859980718 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/L | None | None | 0.9 | N | 0.492 | 0.246 | 0.480801007081 | gnomAD-4.0.0 | 1.64207E-06 | None | None | None | None | N | None | 0 | 0 | None | 5.0221E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9191 | likely_pathogenic | 0.9282 | pathogenic | -1.211 | Destabilizing | 0.978 | D | 0.554 | neutral | N | 0.461212684 | None | None | N |
V/C | 0.9923 | likely_pathogenic | 0.9897 | pathogenic | -0.861 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
V/D | 0.9949 | likely_pathogenic | 0.9961 | pathogenic | -0.965 | Destabilizing | 0.999 | D | 0.798 | deleterious | None | None | None | None | N |
V/E | 0.9858 | likely_pathogenic | 0.9885 | pathogenic | -1.018 | Destabilizing | 0.999 | D | 0.775 | deleterious | N | 0.463438974 | None | None | N |
V/F | 0.9513 | likely_pathogenic | 0.9629 | pathogenic | -1.026 | Destabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | N |
V/G | 0.9437 | likely_pathogenic | 0.9515 | pathogenic | -1.462 | Destabilizing | 0.999 | D | 0.791 | deleterious | N | 0.463438974 | None | None | N |
V/H | 0.998 | likely_pathogenic | 0.9982 | pathogenic | -0.987 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
V/I | 0.1705 | likely_benign | 0.162 | benign | -0.652 | Destabilizing | 0.37 | N | 0.222 | neutral | N | 0.37509127 | None | None | N |
V/K | 0.9919 | likely_pathogenic | 0.993 | pathogenic | -1.069 | Destabilizing | 0.999 | D | 0.778 | deleterious | None | None | None | None | N |
V/L | 0.905 | likely_pathogenic | 0.9063 | pathogenic | -0.652 | Destabilizing | 0.9 | D | 0.492 | neutral | N | 0.417127998 | None | None | N |
V/M | 0.8862 | likely_pathogenic | 0.894 | pathogenic | -0.518 | Destabilizing | 0.998 | D | 0.648 | neutral | None | None | None | None | N |
V/N | 0.9827 | likely_pathogenic | 0.9846 | pathogenic | -0.786 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
V/P | 0.9875 | likely_pathogenic | 0.985 | pathogenic | -0.803 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
V/Q | 0.9926 | likely_pathogenic | 0.9931 | pathogenic | -1.018 | Destabilizing | 0.999 | D | 0.788 | deleterious | None | None | None | None | N |
V/R | 0.9886 | likely_pathogenic | 0.9901 | pathogenic | -0.502 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
V/S | 0.9695 | likely_pathogenic | 0.9721 | pathogenic | -1.244 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
V/T | 0.8947 | likely_pathogenic | 0.8963 | pathogenic | -1.197 | Destabilizing | 0.992 | D | 0.633 | neutral | None | None | None | None | N |
V/W | 0.9991 | likely_pathogenic | 0.9992 | pathogenic | -1.136 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
V/Y | 0.9941 | likely_pathogenic | 0.9953 | pathogenic | -0.873 | Destabilizing | 0.999 | D | 0.752 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.