Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 13888 | 41887;41888;41889 | chr2:178635662;178635661;178635660 | chr2:179500389;179500388;179500387 |
N2AB | 12247 | 36964;36965;36966 | chr2:178635662;178635661;178635660 | chr2:179500389;179500388;179500387 |
N2A | 11320 | 34183;34184;34185 | chr2:178635662;178635661;178635660 | chr2:179500389;179500388;179500387 |
N2B | 4823 | 14692;14693;14694 | chr2:178635662;178635661;178635660 | chr2:179500389;179500388;179500387 |
Novex-1 | 4948 | 15067;15068;15069 | chr2:178635662;178635661;178635660 | chr2:179500389;179500388;179500387 |
Novex-2 | 5015 | 15268;15269;15270 | chr2:178635662;178635661;178635660 | chr2:179500389;179500388;179500387 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1459382951 | 0.298 | 0.883 | N | 0.556 | 0.126 | 0.139678290688 | gnomAD-2.1.1 | 4.38E-06 | None | None | None | None | N | None | 0 | 3.1E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/N | rs1459382951 | 0.298 | 0.883 | N | 0.556 | 0.126 | 0.139678290688 | gnomAD-4.0.0 | 1.13721E-05 | None | None | None | None | N | None | 0 | 1.66786E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs1324858653 | 0.099 | 0.015 | D | 0.399 | 0.165 | 0.194818534648 | gnomAD-4.0.0 | 1.62396E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.91279E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7335 | likely_pathogenic | 0.7617 | pathogenic | 0.063 | Stabilizing | 0.74 | D | 0.595 | neutral | None | None | None | None | N |
K/C | 0.9359 | likely_pathogenic | 0.9389 | pathogenic | -0.011 | Destabilizing | 0.996 | D | 0.847 | deleterious | None | None | None | None | N |
K/D | 0.9127 | likely_pathogenic | 0.9172 | pathogenic | -0.018 | Destabilizing | 0.909 | D | 0.542 | neutral | None | None | None | None | N |
K/E | 0.6028 | likely_pathogenic | 0.6133 | pathogenic | -0.012 | Destabilizing | 0.682 | D | 0.597 | neutral | N | 0.520038641 | None | None | N |
K/F | 0.9581 | likely_pathogenic | 0.9642 | pathogenic | -0.124 | Destabilizing | 0.984 | D | 0.742 | deleterious | None | None | None | None | N |
K/G | 0.5804 | likely_pathogenic | 0.6163 | pathogenic | -0.142 | Destabilizing | 0.009 | N | 0.497 | neutral | None | None | None | None | N |
K/H | 0.6711 | likely_pathogenic | 0.6697 | pathogenic | -0.444 | Destabilizing | 0.987 | D | 0.515 | neutral | None | None | None | None | N |
K/I | 0.9228 | likely_pathogenic | 0.9354 | pathogenic | 0.529 | Stabilizing | 0.953 | D | 0.774 | deleterious | None | None | None | None | N |
K/L | 0.7307 | likely_pathogenic | 0.7849 | pathogenic | 0.529 | Stabilizing | 0.909 | D | 0.459 | neutral | None | None | None | None | N |
K/M | 0.6518 | likely_pathogenic | 0.6832 | pathogenic | 0.314 | Stabilizing | 0.994 | D | 0.548 | neutral | D | 0.52714921 | None | None | N |
K/N | 0.7839 | likely_pathogenic | 0.8087 | pathogenic | 0.37 | Stabilizing | 0.883 | D | 0.556 | neutral | N | 0.476154735 | None | None | N |
K/P | 0.9746 | likely_pathogenic | 0.9741 | pathogenic | 0.401 | Stabilizing | 0.984 | D | 0.565 | neutral | None | None | None | None | N |
K/Q | 0.4036 | ambiguous | 0.3975 | ambiguous | 0.192 | Stabilizing | 0.883 | D | 0.627 | neutral | D | 0.523599715 | None | None | N |
K/R | 0.1323 | likely_benign | 0.1216 | benign | 0.025 | Stabilizing | 0.015 | N | 0.399 | neutral | D | 0.523403735 | None | None | N |
K/S | 0.8083 | likely_pathogenic | 0.8241 | pathogenic | -0.07 | Destabilizing | 0.74 | D | 0.589 | neutral | None | None | None | None | N |
K/T | 0.6621 | likely_pathogenic | 0.698 | pathogenic | 0.079 | Stabilizing | 0.883 | D | 0.539 | neutral | D | 0.523403735 | None | None | N |
K/V | 0.8656 | likely_pathogenic | 0.8818 | pathogenic | 0.401 | Stabilizing | 0.953 | D | 0.647 | neutral | None | None | None | None | N |
K/W | 0.9643 | likely_pathogenic | 0.9633 | pathogenic | -0.158 | Destabilizing | 0.996 | D | 0.847 | deleterious | None | None | None | None | N |
K/Y | 0.9064 | likely_pathogenic | 0.9078 | pathogenic | 0.191 | Stabilizing | 0.984 | D | 0.669 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.